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Protein Overview: rex3

General Information:
Name(s) found: rex3 / SPAC1782.08c [Sanger Pombe]
Description(s) found:
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  • gi|74698333|sp|Q9P7H2.1|REXO3_SCHPO RecName: Full=RNA exonuclease 3 [NCBI NR]
  • gi|7160232|emb|CAB76270.1| exonuclease Rex3 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115627|ref|NP_594715.1| exonuclease Rex3 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50098 probable exonuclease [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • exonuclease Rex3 [Sanger Pombe]
  • RNA exonuclease 3 OS=Schizosaccharomyces pombe GN=rex3 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE EXONUCLEASE: Q9P7H2; [pompepVF.fasta]
  • Putative exonuclease [pompep4896]
  • |||putative exonuclease [pompepnew.fasta]
  • SPAC1782.08c protein [4896.FASTAC]
  • |||exonuclease (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative exonuclease [Schizosaccharomyces pombe]gi|7160232|emb|CAB76270.1| SPAC1782.08c [Schizosaccharomyces pombe]gi|11359239|pir||T50098 probable exonuclease [imported] - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||exonuclease |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9P7H2) Putative exonuclease [pompep4896_normal_reversed]
  • |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • RNA exonuclease 3 [nr-271106-contam.fasta]
  • SPAC1782.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC1782.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • RNA exonuclease 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rex3 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: ncRNA 3'-end processing [ISS]
    RNA processing [ISSLink to PubMed article]
    U5 snRNA 3'-end processing [ISS]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [ISS]
    Molecular Function: 3'-5' exonuclease activity [ISSLink to PubMed article]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSPLGQFKH IVCPFLRTGR KCQSRNCFFS HDFQNSTKIS PPYSENVEGY PKVKIEKSLP  60
   61 YKYDNCKLSI CVPIVTTCIP YHSVENLNFN IRQNISTTLN LEKTNDSIKE TKNENFRMDV 120
  121 LETYKCKQLN HQTTHLPTNT VLKKRSLFND AISIVPNKKK QLVSAISTNS DSQGASSNII 180
  181 PTPKYDSNSP AGHELRKRMT HLLYESYKDL GYSNAESSML ALLDEKNICE TANSKMIYSS 240
  241 SCKSKILSLK KAPKKNEIQG STPDEKLESL VHSEEELILW GYNIGDVAPV NPPDELRECD 300
  301 RCGTRFADPR GPCTYHWGKL FREKQGGEKI RTYTCCGVKE GDSSGCIIED NHVFKYRHLP 360
  361 YLASVHPFSY LPDSTNSKQL SHCALDCELC YTTNGMELAR LTVVAKESII MDVFIKPKGK 420
  421 ILSLNTRFSG IHDAKELESG ITMDQMYIKI KELGMNKNTI LIGHGLENDL NAMRLIHKRV 480
  481 IDTALLFTHA RGPPFRYSLK YLTKKYLGTT IQTSTHDSEE DAVSALQLVF YKTKSNESQN 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] deduced N/A No confident structure predictions are available.
    2 View Details [129..362] FFAS03 1.02 RNA polymerase II-TFIIS complex
    3 View Details [363..540] PSI-BLAST 32.0 No description for 2p1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle