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Protein Overview: gle1

General Information:
Name(s) found: gle1 / SPBC31E1.05 [Sanger Pombe]
Description(s) found:
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  • pir||T40202 probable RNA export factor - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582956|sp|O94652.1|GLE1_SCHPO RecName: Full=Nucleoporin gle1; AltName: Full=Nuclear pore protein gle1; AltName: Full=RNA export factor gle1 [NCBI NR]
  • gi|4494111|emb|CAB39139.1| RNA export factor Gle1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19111893|ref|NP_595101.1| RNA export factor Gle1 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • RNA export factor Gle1 [Sanger Pombe]
  • Nucleoporin gle1 OS=Schizosaccharomyces pombe GN=gle1 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE RNA EXPORT FACTOR: O94652; [pompepVF.fasta]
  • Putative RNA export factor [pompep4896]
  • |||nuclear pore complex (putative) [pompepnew.fasta]
  • SPBC31E1.05 protein [4896.FASTAC]
  • |||RNA export mediator|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative RNA export factor [Schizosaccharomyces pombe]gi|4494111|emb|CAB39139.1| SPBC31E1.05 [Schizosaccharomyces pombe]gi|7492922|pir||T40202 probable RNA export factor - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||RNA export mediator |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O94652) Putative RNA export factor [pompep4896_normal_reversed]
  • |gle1||RNA export factor Gle1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC31E1.05 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC31E1.05 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |gle1||RNA export factor, cytoplasmic nucleoporin Gle1|Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Nucleoporin gle1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gle1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: translational termination [ISS]
    translational initiation [ISS]
    poly(A)+ mRNA export from nucleus [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: inositol hexakisphosphate binding [ISS]
    translation initiation factor binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTKTTPLIH AKLDEKIISS YNDANGLDID DLWDIYNEKT RRMIHIISQR YKPKKQSPFP  60
   61 VIADENVRIF PPLHKTIDWA KKRNVEEQNL IEQSITESQR IFSEKQRLEQ ERFNRELLEK 120
  121 KRIEAERQRL KDEEERRKKE LMEKEKKEKE RIRLIEEQKH KENEQRRLKQ EQIDAKRKEE 180
  181 EAREKRMKET FKDDPEEDSN MAWSIIHKIK TEVVAPISEK KELKNYCFTQ KRKITPRLGQ 240
  241 ITKSNSQIMK ITQLLQQTFQ EARNTDPLVY KWVLNFFCKS VVKQAEAEVA VNPISAYPLA 300
  301 KVCLLLQTQN ADLKDLLFAR LQKNCPWVIP FWYDHGTENG KKKMGFKKLS DGHWEQNTTY 360
  361 NERQCGIFAV YAAILSLDDS LAPESWRTFS RLLNLPSPSQ LMKSDLELGQ TLCSIVSTYL 420
  421 DIAGQSLLRI YGRQAKKLIV CSFSEAYLGA NGGGSQYGRL RIVGEDWMKG QGGLKFSFEP 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 18.045757 Heavy meromyosin subfragment
    2 View Details [325..396] deduced N/A No confident structure predictions are available.
    3 View Details [397..480] MSA 1.025983 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle