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Protein Overview: SPCC18B5.10c

General Information:
Name(s) found: SPCC18B5.10c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • TREX complex subunit Tex1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: transcription export complex [ISSLink to PubMed article]
    Biological Process: mRNA export from nucleus [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCASVTESLP KFPELKTRDL QGQQGPIRSL GWNLSGSRLA SSSSSGSVLV WNSDRLDFKF  60
   61 TTELGNRGYG LVEQLVWDPT HSDRLMAVYA GKMIRFWDFR SAKPIAEIES NYENIYATWS 120
  121 PSGNYCCASS RDDMLSFIDA RERRIMETFQ QPCETNECCW SFSEDLFFMT TGLGTVQIME 180
  181 WPSLKRVYDI KAHNSNCFCI EFSPDNRHLA IGGADAITSL WDPQELICER SITRMDYPIR 240
  241 TLSFSYDSRY LASGSEDRYV DIADTKTGDQ IWKIPTNGPL NKVAWHPTKH ILAYAVSEPN 300
  301 SSGLKIFGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 73.0 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle