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Protein Overview: SPBC4C3.06

General Information:
Name(s) found: SPBC4C3.06 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • actin cytoskeletal protein Syp1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 818 amino acids

    Gene Ontology:
    Cellular Component: site of polarized growth [ISSLink to PubMed article]
    actin cytoskeleton [NASLink to PubMed article]
    actin cortical patch [ICLink to PubMed article]
    Biological Process: actin cytoskeleton organization [NASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLTKTEYV DAFLSNYSPN DSMSIFRQRL EQVRLDNDML SQWIRERMDI ERQYSDQLHK  60
   61 LAMNMQEKNN SSFAFNYAWK QLEGETLEIS RYHSQIIGQI ASQVYKPLID YYTSSPQTAT 120
  121 LRRLAERLST VAEEMASSSV PGLKGLKKKG RDADTKSQND LTASRATWDS DAPLAFEKLQ 180
  181 IVDEERLLIL KQVYLTIASL ETDTALKQQE FFSKSMAVYS DLPIEGEIRQ FMNSTSKVMS 240
  241 SASANKPSKS SGFHINNGKS KEEKSHGENE SGGKLKNKMS TLFRRKTIMP KKDKKPSHKS 300
  301 NGRPNKLTAF FNKNSKASSI SSAEEHPSNI DDSSIERRHY DSNHSSQIRD HPSTNNNASS 360
  361 YQNFNETSDE GEDNDATIRA NNVRSSFLEA PLPVQPNVQA ETVTPKISSK ASPFNKPNSV 420
  421 HSEASRNTPS SIDRENASHS NPIMMHGNDF GGNFNNMQSR STTTSPTSAV ASPAPTENED 480
  481 SNAAIERVAN TLRKNPTISR RTRRAGTMDR YATASSDYME SNLGSLPNLS TLSLQSGPDS 540
  541 TATWHPEFPN SSGLSASIVE KYSGELSEDG LLHPSCSGHI FMKYTSDFNT PPPEMGVRVA 600
  601 SEFPMSFTHL NDHAVKYGPS ENTLSLIPEL LLSPIKVTDF NLHLDSINGA SCIPLTVVQK 660
  661 WKHDESSSSM IAFVKPNPVW RNLGSSLHIE KLVIIVYLGE NVLVKSCQSS PAGEFSRKTS 720
  721 KLKLHLSNIN ISSSGFKILA KFAISPSAAI RKPVIEFRIR MVDSSNNPGL TKLFLKPDMF 780
  781 DTTSSSGGSQ LESAYEETKV PTSYGIHVRE CSVFADMS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 57.69897 No description for 2v0oA was found.
    2 View Details [244..508] MSA 2.296996 View MSA. No confident structure predictions are available.
    3 View Details [509..818] FFAS03 1.74 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; Mu2 adaptin (clathrin coat assembly protein AP50)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.47443303633602 bayes_pls_golite062009
  • protein binding
    		•  1.05973889460624 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle