| Protein: | SPBC4C3.06 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 818 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC4C3.06.
| Description | E-value | Query Range |
Subject Range |
|
|
457.0 | [0..25] | [783..20] |
|
|
456.0 | [0..25] | [783..20] |
|
|
455.0 | [0..25] | [783..66] |
|
|
454.0 | [0..25] | [783..20] |
|
|
454.0 | [0..25] | [783..20] |
|
|
454.0 | [0..25] | [783..20] |
|
|
447.0 | [0..25] | [783..127] |
|
|
434.0 | [0..25] | [783..20] |
|
Region A: Residues: [1-243] |
1 11 21 31 41 51
| | | | | |
1 MESLTKTEYV DAFLSNYSPN DSMSIFRQRL EQVRLDNDML SQWIRERMDI ERQYSDQLHK 60
61 LAMNMQEKNN SSFAFNYAWK QLEGETLEIS RYHSQIIGQI ASQVYKPLID YYTSSPQTAT 120
121 LRRLAERLST VAEEMASSSV PGLKGLKKKG RDADTKSQND LTASRATWDS DAPLAFEKLQ 180
181 IVDEERLLIL KQVYLTIASL ETDTALKQQE FFSKSMAVYS DLPIEGEIRQ FMNSTSKVMS 240
241 SAS
|
| Detection Method: |  |
| Confidence: | 57.69897 |
| Match: | 2v0oA |
| Description: | No description for 2v0oA was found. |
|
Region A: Residues: [244-508] |
1 11 21 31 41 51
| | | | | |
1 ANKPSKSSGF HINNGKSKEE KSHGENESGG KLKNKMSTLF RRKTIMPKKD KKPSHKSNGR 60
61 PNKLTAFFNK NSKASSISSA EEHPSNIDDS SIERRHYDSN HSSQIRDHPS TNNNASSYQN 120
121 FNETSDEGED NDATIRANNV RSSFLEAPLP VQPNVQAETV TPKISSKASP FNKPNSVHSE 180
181 ASRNTPSSID RENASHSNPI MMHGNDFGGN FNNMQSRSTT TSPTSAVASP APTENEDSNA 240
241 AIERVANTLR KNPTISRRTR RAGTM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [509-818] |
1 11 21 31 41 51
| | | | | |
1 DRYATASSDY MESNLGSLPN LSTLSLQSGP DSTATWHPEF PNSSGLSASI VEKYSGELSE 60
61 DGLLHPSCSG HIFMKYTSDF NTPPPEMGVR VASEFPMSFT HLNDHAVKYG PSENTLSLIP 120
121 ELLLSPIKVT DFNLHLDSIN GASCIPLTVV QKWKHDESSS SMIAFVKPNP VWRNLGSSLH 180
181 IEKLVIIVYL GENVLVKSCQ SSPAGEFSRK TSKLKLHLSN INISSSGFKI LAKFAISPSA 240
241 AIRKPVIEFR IRMVDSSNNP GLTKLFLKPD MFDTTSSSGG SQLESAYEET KVPTSYGIHV 300
301 RECSVFADMS
|
| Detection Method: | |
| Confidence: | 1.74 |
| Match: | 1gw5M |
| Description: | Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; Mu2 adaptin (clathrin coat assembly protein AP50) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.47443303633602 | bayes_pls_golite062009 |
| protein binding | 1.05973889460624 | bayes_pls_golite062009 |
