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Protein Overview: SPAC23H3.03c

General Information:
Name(s) found: SPAC23H3.03c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • nitrogen permease regulator family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of proline transport [ISS]
    cellular response to amino acid starvation [ISS]
    regulation of TOR signaling pathway [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYSEEGWMD QADSFPPRLL AIFFALFDPL QGPIVACEAP AGSVTNVDGG KNCLLPFETI  60
   61 SDYVIPKREL CNKTITVCTN HYQVIGHPIS IIGSNYERNA LIFNMCMIFH EEEDSACYIP 120
  121 LVKRLARNLE VLEKQIHYIS DLNKRPVIFS VIEQILEDMN NFCECMIQLD DQNSINIKLF 180
  181 PVFPSPPTVK SFHVPILTAQ LDLLMDKNWD MTVQKVYPFI NGINSVQRIA ELANVSYRSC 240
  241 QKCMEHFLYY GCLIIADIFQ FHNIYAMTTN APNLLQDPDF QRECTAYVST NSSNAKNVTF 300
  301 ATIFKLYCSL RQGLRVKDWM NENKEIFKGL DVRRLISFGT IKGLIYRVHK YPYLERRTMR 360
  361 NNLTEEEKKL LGLLDGKHHF DELCVTLKKS PKVVNEMIAG LGDACFIYV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] MSA 1.02796 View MSA. No confident structure predictions are available.
    2 View Details [136..345] MSA 2.030929 View MSA. No confident structure predictions are available.
    3 View Details [346..409] MSA 1.021989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle