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View Structure Prediction Details

Protein: SPAC23H3.03c
Organism: Schizosaccharomyces pombe
Length: 409 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23H3.03c.

Description E-value Query
Range
Subject
Range
NPRL2_MOUSE - Nitrogen permease regulator 2-like protein OS=Mus musculus GN=Nprl2 PE=2 SV=1
535.0 [0..18] [400..6]
gi|114587063 - gi|114587063|ref|XP_001169182.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
535.0 [0..18] [400..6]
gi|57101208 - gi|57101208|ref|XP_533817.1| PREDICTED: similar to Tumor suppressor candidate 4 (NPR2-like) (Gene 21...
535.0 [0..18] [400..6]
gi|109039416 - gi|109039416|ref|XP_001099730.1| PREDICTED: tumor suppressor candidate 4 isoform 4 [Macaca mulatta]
533.0 [0..18] [400..6]
NPRL2 - nitrogen permease regulator-like 2 (S. cerevisiae)
533.0 [0..18] [400..6]
gi|62751419, gi|... - gi|62751419|ref|NP_001015547.1| tumor suppressor candidate 4 [Bos taurus], gi|59857859|gb|AAX08764.1...
533.0 [0..18] [400..6]
gi|27370866, gi|... - gi|27370866|gb|AAH41229.1| Nprl2-pending-prov protein [Xenopus laevis], gi|147906324|ref|NP_00108010...
518.0 [0..18] [398..5]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYSEEGWMD QADSFPPRLL AIFFALFDPL QGPIVACEAP AGSVTNVDGG KNCLLPFETI  60
   61 SDYVIPKREL CNKTITVCTN HYQVIGHPIS IIGSNYERNA LIFNMCMIFH EEEDSACYIP 120
  121 LVKRLARNLE VLEKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IHYISDLNKR PVIFSVIEQI LEDMNNFCEC MIQLDDQNSI NIKLFPVFPS PPTVKSFHVP  60
   61 ILTAQLDLLM DKNWDMTVQK VYPFINGINS VQRIAELANV SYRSCQKCME HFLYYGCLII 120
  121 ADIFQFHNIY AMTTNAPNLL QDPDFQRECT AYVSTNSSNA KNVTFATIFK LYCSLRQGLR 180
  181 VKDWMNENKE IFKGLDVRRL ISFGTIKGLI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [346-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRVHKYPYLE RRTMRNNLTE EEKKLLGLLD GKHHFDELCV TLKKSPKVVN EMIAGLGDAC  60
   61 FIYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle