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Protein Overview: SPBC3B8.04c

General Information:
Name(s) found: SPBC3B8.04c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • membrane transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 867 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: sodium ion transport [IEA]
    transmembrane transport [IEA]
    Molecular Function: transmembrane transporter activity [RCALink to PubMed article]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSHSLQFN AVPEWSESYI AYSNLKKLIY SLEHEQITLQ QGAPDEETRL LEHERRSPDD  60
   61 RFMFALDKEL QGIVEFYAPK EKEIADQYGR IKGEFETYEN EYMSQGNNIN YPTPERLQKS 120
  121 SASRKSGRMA RSQELPRITS SNREIYLNGQ TSDGGYAAPA ISRAESTAIQ PSEPHDVDTS 180
  181 KNGLSKKQHS EAQPEVQGND DEVEEEDDDD DDEDEDEDED EDNNNNNRWL LIEQYPSDIV 240
  241 AYENFVSLKR KLTQLYVSIH DLISYVHLNY TGFSKILKKY DKTLGSSLRE SYMKRVNQAY 300
  301 PFLPATGKTL SKRLNIVAEW YAKLCCQGDT FVAIRRLRGH LREYVAWERN TIWREMMAME 360
  361 RRTQAARLSG LKPVAADEKE SEQPPYFTIK TKFGVFRIPR CFFNSTIATL ITIIVIFILL 420
  421 LSFPVIDNRE QNNCLALLVM VSLLWATEAI PLFVTSFLVP FMTVFLKILR DENGSPLSGK 480
  481 ESTKVIFSSM WNPTIVLLLG GFTIAAALSK YHIAKRLATS ILAHAGRKPR SVLLTNMFVA 540
  541 MFASMWISNV AAPVLCFSII QPLLRNLPAE SDFAKILIVG IALASNVGGI ASPISSPQNI 600
  601 VALQNMDPAA GWGEWFAVSI PVSLLCIFSI WFLLSFGLLK DEHITLAKIR STKDTFTGVQ 660
  661 WFISIVTIGT IVLWCLERRF DEVFGDMGVI ALVPIIVFFG TGLLTKEDFN NFLWTVIVLA 720
  721 MGGVALGKVV SSSGLLELIA LKIGNAVSSL NTFRVLLIFS ALTLVVSSFI SHIVAAMVVL 780
  781 PIVHEVGSRL ADPHPRLFVL ASGMMCSLAM ALPTSGFPNM TAIMMENEAG KRYLKVSDFL 840
  841 KAGIPATLIS FVILLLIGTP IMRALGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..301] PSI-BLAST 17.69897 Heavy meromyosin subfragment
    2 View Details [302..381] deduced N/A No confident structure predictions are available.
    3 View Details [382..867] PSI-BLAST 23.154902 Bacterial aa3 type cytochrome c oxidase subunit I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • ion transmembrane transporter activity
    		•  6.40081133240949 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  6.07151695779993 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.9695962563814 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.70388681170981 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  5.36384130014444 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  5.25497087659898 bayes_pls_golite062009
  • transporter activity
    		•  4.2806100513341 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.19885907933483 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.09889747645813 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  1.27735515053931 bayes_pls_golite062009
  • binding
    		•  0.89004160546195 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.803860393147327 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.803860393147327 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.803860393147327 bayes_pls_golite062009
  • protein binding
    		•  0.358081002328109 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.349031670056176 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.336122020727214 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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