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Protein Overview: SPBC14C8.17c

General Information:
Name(s) found: SPBC14C8.17c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • SAGA complex subunit Spt8 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    nuclear chromatin [IC]
    cytosol [IDALink to PubMed article]
    SAGA complex [ISSLink to PubMed article]
    Biological Process: chromatin remodeling [ICLink to PubMed article]
    regulation of cell separation during cytokinesis [IMPLink to PubMed article]
    histone acetylation [ICLink to PubMed article]
    chromatin-mediated maintenance of transcription [ICLink to PubMed article]
    regulation of transcription from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: transcription cofactor activity [ISSLink to PubMed article]
    TATA-binding protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEESESFS YPMLLPSDGL YPEDDDDADM DQDKNPEENV MNEKEDEDVD AVDEKSGEED  60
   61 VEMDTMEDEN ENDEDTEQTS EKKETEETPK ENPLEKLKQK ASTASFYDVV PTLAIPMATS 120
  121 INAFAFTSDL KWLFTGGEDG YIRKYDFFPS INGDLSLTVA QRHPFVDTVT KAGILLNYWE 180
  181 NAYDGNKPSS VYSLAAHSRG LWVLSGVNNG DIILYSTRHQ EGYPVTSLKK HTAPVSCLAL 240
  241 HGSEKKVLSG SWDKMVYYWD LNTGDAISTY NCESGQISNI VYRPSGAVNP WGSESDDMRS 300
  301 LFGTPASSSS YDALFDEEVE KAIEEETKSV QANEENETEK PSQTESTTNN DNIKAPSESS 360
  361 SEESNIFLTT SIDGVMNVWD HRMVDSVLKY PVPKGVPPWA MSACWSPDGN NIYIGRRNGI 420
  421 VEEYNIHSGK EPVRSLKMPL DSGPVSNVYS MPNGRHLVIS SFDNIRLYDL QSKAGIGFLI 480
  481 IPGHHGGLVS SLYVDTSCQF MFSASGNRGW QGTTTEVFLG YQIMTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 19.30103 No description for 2pm9A was found.
    2 View Details [362..438] PSI-BLAST 6.30103 No description for 2oajA was found.
    3 View Details [439..526] PSI-BLAST 51.39794 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle