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Protein Overview: SPBC21D10.10

General Information:
Name(s) found: SPBC21D10.10 [Sanger Pombe]
Description(s) found:
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  • pir||T11682 transcription factor SMAP homolog - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582425|sp|O74350.1|YNOA_SCHPO RecName: Full=Bromodomain-containing protein C21D10.10 [NCBI NR]
  • gi|3560213|emb|CAA20766.1| bromodomain containing protein 1, Bdc1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112795|ref|NP_596003.1| bromodomain protein [Schizosaccharomyces pombe] [NCBI NR]
  • bromodomain protein [Sanger Pombe]
  • Bromodomain-containing protein C21D10.10 OS=Schizosaccharomyces pombe GN=SPBC21D10.10 PE=2 SV=1 [Swiss-Prot]
  • BROMODOMAIN PROTEIN: O74350; [pompepVF.fasta]
  • Hypothetical bromodomain containing protein [pompep4896]
  • |||bromodomain protein [pompepnew.fasta]
  • SPBC21D10.10 protein [4896.FASTAC]
  • |||bromodomain protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical bromodomain containing protein [Schizosaccharomyces pombe]gi|3560213|emb|CAA20766.1| SPBC21D10.10 [Schizosaccharomyces pombe]gi|7493493|pir||T11682 transcription factor SMAP homolog - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O74350) Hypothetical bromodomain containing protein [pompep4896_normal_reversed]
  • |bdc1||bromodomain containing protein 1, Bdc1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC21D10.10 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC21D10.10 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    NuA4 histone acetyltransferase complex [IDALink to PubMed article]
    nuclear chromatin [NAS]
    Biological Process: chromatin remodeling [IPILink to PubMed article]
    histone acetylation [IC]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIAQEVAVL QYLDIQQENP NAPNEELFNR TAESSLLLEP IEQDQLKDLV EEWMHDSNKS  60
   61 DSKLLSNQVS QNDNDARKNL RKRLRNDVLK DLAEEIQGCE KKLESLYEEV AKAKAKAVED 120
  121 QLALEEADKE AKKAKTEAPV EAANKSLRSR KKTPEIAAPA NIEPEVAPTT KTPKKRAALS 180
  181 NEEKQSLKKF QSAMLPMLDN ISNHRFGAPF SHPVNRKEAP DYDSLVYKPQ DLRTLKNMIK 240
  241 EGNITEVDEL YREVLRIFAN CKMYNGSDPA NAMSIWGDEC FRYTEELFDI YRQASTRSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..299] PSI-BLAST 30.39794 No description for 2f6jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle