YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC922.03

General Information:
Name(s) found: SPAC922.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • 1-aminocyclopropane-1-carboxylate deaminase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: amine catabolic process [IEA]
    Molecular Function: pyridoxal phosphate binding [IEA]
    1-aminocyclopropane-1-carboxylate deaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLEQFKKYP LTFGPTPITS MKRLSKTLGG KVEIFAKRED CNSGLAFGGN KIRKLEYLIP  60
   61 EAIDGGYDTL VSIGGIQSNQ TRQVAAVAAH LGLDCVLIQE DWVDYKDTMY DRVGNIELSR 120
  121 IVNADVRLDS SKFDIGIRPS FKNALEELTK KGKKPFPIPA GCSEHPYGGL GFVGCVEEIY 180
  181 EQEKQLGFKF DKIVVCTVTG SSFAGIIVGM ALTGRQKDVI GIDASATPEK TKAQVLRIAQ 240
  241 NTAKLIGLEK ELTESDVNID TRFAHPAYGI PNEGTIEAIK LCGATEGVLT DPVYEGKSMQ 300
  301 GLIHLVRNNE IAEGSKVLYI HLGGAPALSA YSAYFKNT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 74.0 Crystal structure of ACC Deaminase complexed with Inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cysteine synthase activity
    		•  4.72413272579429 bayes_pls_golite062009
  • catalytic activity
    		•  2.38994231321972 bayes_pls_golite062009
  • 1-aminocyclopropane-1-carboxylate deaminase activity
    		•  2.36589679524219 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.99526226543975 bayes_pls_golite062009
  • lyase activity
    		•  1.87743897464083 bayes_pls_golite062009
  • cystathionine beta-synthase activity
    		•  1.4517088142802 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.923824749425553 bayes_pls_golite062009
  • binding
    		•  0.791501201936306 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.476674617721478 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  0.37325071016009 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.249761226675912 bayes_pls_golite062009
  • threonine synthase activity
    		•  0.0538811973418393 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle