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Protein Overview: SPBC776.06c

General Information:
Name(s) found: SPBC776.06c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • spindle pole body interacting protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 598 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell cortex [IEA]
    cytosol [IDALink to PubMed article]
    Biological Process: establishment of cell polarity [ISS]
    actin cortical patch localization [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIDYLLTAI FDPDRGPVLQ YQCPENGEAS DLHFLAELML PDRVHERRED WSLFFIHFSK  60
   61 KSNVFSLFSN VDDINFEPSD SNMYYVLNTI RAKRVEGTRR GGSVFAMAIC TTFPHVHALK 120
  121 PLLDTAWEIF DSSPSLKTLS MLHKSFNLHN FQSFYQKLSL DSSLILALNN FWSFFNLYLT 180
  181 NSPHIMNDII NKDIDNIPKP GSELIELSRD SYNSQATFCL SAESQERYVT CVIPSIHIPE 240
  241 CVGEVSISNL INTFIDGPSP FMNTDISADI NPINVLITAL LISKKVLFLT KTSSASVLAD 300
  301 FVLSSCALVS GATGLLQGLT RITFPYIDLS NVESLVKLPG YLAGVMNPAF THHADWWDVL 360
  361 CDIDNQTIQV SSNLFSDATT TMDTKSLFNN TSPFTPISKD NQDDEIFIKD LRKFLKADDK 420
  421 ETLVRWRVRL YIQSFIRKAT SYEALFLESS PLNPYYKDYK FKGFGWSWDN DDEKVNELLY 480
  481 LAPKFEAWRQ ASTYKDYCYR LHCASTPVLR CMDIQFHLDR LRNSSLSTTD AAEIFLALES 540
  541 HIRTEEDVNY LLSNCPLHSG GLSVIAFGLY HISDKVRKAV SKLLNRIETH KVNFLFHC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 8.079996 View MSA. No confident structure predictions are available.
    2 View Details [188..375] MSA 5.085994 View MSA. No confident structure predictions are available.
    3 View Details [376..598] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle