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Protein Overview: sen34

General Information:
Name(s) found: sen34 / SPBC19C7.07c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • tRNA-splicing endonuclease subunit Sen34 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: tRNA-intron endonuclease complex [ISSLink to PubMed article]
    mitochondrial outer membrane [ISSLink to PubMed article]
    Biological Process: tRNA-type intron splice site recognition and cleavage [ISS]
    Molecular Function: tRNA-intron endonuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDEKFPISY VHGKFLVFDV QAVEVFRKNY HILGTLVGTL PQLPQQNVFL GLPMELSKEE  60
   61 AFYLIEKGIS YIVDDTKVHK QLLENTTKDD VKQCLKKRQS LAYDQMIAAK KKENEKKIEI 120
  121 MKKLGRTLPL DPLNYDEHDS FDLSWIPVDT VTTRIAEKSS MNDDFHKEED VFENLDINRY 180
  181 LMFKSLVDTG FYLNPGLRFG CQFVAYPGDA LRYHSHYLVN SYKWDQEIPV LFLIGGGRLG 240
  241 TAVKKTWLIG GSNDRNINMN GEKSKEELLL LPVRHFSIEW AGFG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] MSA 1.043992 View MSA. No confident structure predictions are available.
    2 View Details [106..284] PSI-BLAST 28.522879 Crystal structure of tRNA-intron endonuclease from Sulfolobus tokodaii


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle