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Protein Overview: SPCP25A2.03

General Information:
Name(s) found: SPCP25A2.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • THO complex subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 752 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    THO complex [ISSLink to PubMed article]
    Biological Process: mRNA export from nucleus [ICLink to PubMed article]
    RNA elongation from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVQKGLIEA FYNTYPLEKA KELDKSPLCS EYELFIKELW PSIVESFHNS TEFETAIRFC  60
   61 CYETARKSEI GLEERLKCLF AILDLLVIGN EINESFCDHL LPFLILEELM DIHTVNECAK 120
  121 LYEYFETRPS LMKGIVSNRG RGPVLLRISN ELLRRLSRQE NSSFCGRIDI LLSKAFPPEE 180
  181 RSGANLRGDY NTVHSFGKVE LSPPSTPISD RTDLSYHKKL NTLFTAYWDL QCMCSNPPKL 240
  241 LASDTLPKFI DAAGSAIQAF ESILQNTFFN GKSNPTIDPN SSSLLSEKYI TLDKGFPSKY 300
  301 IYSRSLFEYQ LSDEDFRLQA ILQLIIIFDF LLDHSKERIE RRTLEKWTNK AVIPIVILSD 360
  361 EDTSKLNELS KEAYSFLHTA RCGSVQRTIK EIIHIEGNWK LWKGLGCPSL EKPLVDKAAI 420
  421 DEAVEGLKKL TNTPVKLRFA MGNAALSRLW EQAGENTLDD LKKEERYRIP SPESFLSGVK 480
  481 ADKFEIEEAV RDDDKHFHEQ SLATKTWRAF RSAINSHLQN FSDTGLGDVE LLCNSIEGKP 540
  541 TTSKITPSIP PAFDIHIIEG EELLEEMKKR ENVKHNSQNF ASPMQTDAEG DIVQNEEEKE 600
  601 SVEVEEGKHK NDLPKVSPKP PTEGVDSEVN GESLVQVNKV LKSEDDNTSE ASKDPSSHVK 660
  661 SPENIEKLKQ NDDHFEVTEE ITSTINSKIS EKQENNVAET ILEVTSSPKS SENSQKQSEI 720
  721 TKKRGRDEED EPSDLHSSPK RPKTGEDGEI VL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] deduced N/A No confident structure predictions are available.
    2 View Details [177..308] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [309..539] deduced N/A No confident structure predictions are available.
    4 View Details [540..752] MSA 1.080995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle