YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: rrp16

General Information:
Name(s) found: rrp16 / SPAC22F8.09 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • rRNA processing protein Rrp16 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [ISSLink to PubMed article]
    Biological Process: ribosomal large subunit export from nucleus [ISS]
    ribosome biogenesis [ISSLink to PubMed article]
    rRNA processing [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKERNAPS QYKQSSRKNK RAWRKNIDLE DIESGLEQTR DEEIKGGNVE HKPNDALFVI  60
   61 DTLGDDRIAK RSRKKIKPLK VDQILENKSS IEKVHSHLTN NSTESNKKGK IFSRKELNRL 120
  121 QALVYKNKDG LTATSAASEL KNTKQPKESY DVWETNPTVT IPVKRPSTLS KLPESLTENN 180
  181 AKVPNVVIAD PGMSYNPDAA AWMKLLDTKG SEELKKEQKR ISELEEKERI QKKAFEDKGL 240
  241 VSDQDVNHSI DSDDQSEHEQ AETPIPSSKN KRKTRSQRNK IRQRREEELR LLEQKKNEEL 300
  301 LRTIDKAPAI SKKLQQKDKA EKFSNKAVSS STTEIKLKKK KFGKHRLPNN PLEIKLGDEL 360
  361 TSSLRELKPE GNLFADRYLS LQQRAMVPPS LPVLKKSKYR AKIKEKYSHK DFHLQKNSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..419] PSI-BLAST 18.09691 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle