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Protein Overview: swd1

General Information:
Name(s) found: swd1 / SPAC23H3.05c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • COMPASS complex subunit Swd1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 398 amino acids

    Gene Ontology:
    Cellular Component: Set1C/COMPASS complex [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: chromatin remodeling [ICLink to PubMed article]
    histone methylation [IMPLink to PubMed article]
    histone H3-K4 methylation [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLELLDPFS IPDYPEALTT TLKHGHATSI RFSTNGYHLA SGLVNGSVVI WDLSTFSVSR  60
   61 VLTGHTRAIQ SVCWSSCDRF LLTASRDWKC ILWDLRDGSI VYQVVLSAPV WSASLHPHKI 120
  121 NTFVASLLDE SPQLIIVDDG IPKHKYLPTN PDIDENYSDR RNRSKHVTLV SFFHPSGEYI 180
  181 LSGTSKGWFH VIDASTTKIR SSHRITSQSI KQIRLSFCKR FLIFNSTDRV IRTVSIQDLD 240
  241 NPEVEHKFQD VVNRLQWNSC GFSQTGEFVF ATTYQMAHAI YVWERGMGSL VKILEGPKEE 300
  301 LVDVDWHPVF PCVASVGLDS GSIYIWAVEQ KESWSAFAPD FQELEENIEY EEPEDEFDIH 360
  361 DETGKSEEEE YFTSVVKILP HDSSAEQPFV MPPTLSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 55.522879 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle