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Protein Overview: SPACUNK4.15

General Information:
Name(s) found: SPACUNK4.15 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • 2',3'-cyclic-nucleotide 3'-phosphodiesterase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    clathrin-coated vesicle [ISS]
    Biological Process: RNA metabolic process [IEA]
    cyclic nucleotide metabolic process [ISSLink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQFFRTQPL TDRTTSHGFA EVSSEDHCYC VWLVPAISSD IELRYRTFVD WAVCHKVDFE  60
   61 EMQLPTAPHI TLARGIKLKP NQSFKSVLQY IASKRKSPLN IKFGKVAIGD SFYKRVYIQV 120
  121 EKTPGLEELQ NAAYDLADTS DPFNVIEHPY MPVIYAKSIC SDYSTSDPIE TISSIGQASW 180
  181 GKACFLELIQ LNKANHQGYV CDRIEFTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] FFAS03 1.4 tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.19518602069999 bayes_pls_golite062009
  • cyclic-nucleotide phosphodiesterase activity
    		•  0.943836585803615 bayes_pls_golite062009
  • catalytic activity
    		•  0.853948963582441 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.72614328951284 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle