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Protein Overview: SPAC1B3.04c

General Information:
Name(s) found: SPAC1B3.04c [Sanger Pombe]
Description(s) found:
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  • pir||T38022 probable GTP-binding protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3219963|sp|O13869.1|YE14_SCHPO RecName: Full=Uncharacterized GTP-binding protein C1B3.04c [NCBI NR]
  • gi|2330738|emb|CAB11233.1| mitochondrial GTPase Guf1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115700|ref|NP_594788.1| mitochondrial GTPase Guf1 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • mitochondrial GTPase Guf1 [Sanger Pombe]
  • Uncharacterized GTP-binding protein C1B3.04c OS=Schizosaccharomyces pombe GN=SPAC1B3.04c PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE GTP-BINDING PROTEIN; ELONGATION FACTOR TU FAMILY: O13869; [pompepVF.fasta]
  • PUTATIVE GTP BINDING PROTEIN, GTPASE; ELONGATION FACTOR TU FAMILY: O13869; [pompepV13]
  • Putative GTP-binding protein C1B3.04c [pompep4896]
  • |||putative GTP-binding protein [pompepnew.fasta]
  • |||GTP binding|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative gtp binding protein, gtpase; Elongation factor Tu family [Schizosaccharomyces pombe]gi|2330738|emb|CAB11233.1| SPAC1B3.04c [Schizosaccharomyces pombe]gi|3219963|sp|O13869|YE14_SCHPO Putative GTP-binding protein C1B3.04cgi|7492621|pir||T38022 p [nrdb_11152004_Chlamydomonas]
  • |||translation elongation factor|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (O13869) Putative GTP-binding protein C1B3.04c [pompep4896_normal_reversed]
  • |||mitochondrial GTPase involved in translation Guf1 |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC1B3.04c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC1B3.04c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual [spombe-190209-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 646 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: positive regulation of mitochondrial translation [ISS]
    Molecular Function: GTP binding [ISSLink to PubMed article]
    GTPase activity [ISSLink to PubMed article]
    ribosome binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFRLSRTF SLETCLKSSS FKIRWRFFSV SYASRKLASE DNKPSIQEVV RGIPQNRVRN  60
   61 WAVIAHIDHG KSTLSDCILK LTGVINEHNF RNQFLDKLEV ERRRGITVKA QTCSMIYYYH 120
  121 GQSYLLNLID TPGHVDFRAE VMHSLAACEG CILLVDASQG IQAQTLSNFY MAFSQNLVII 180
  181 PVLNKVDLPT ADVDRTLIQV QQTFDIPMSK PILVSSKTGK NVEQILPEII QKIPPPKGSE 240
  241 NAPLRCLLID SWYNSYQGVI GLVRIMEGFI KKGGKVMSVN TGRKYEVQQV GIMYPDMTEV 300
  301 SRLRAGQVGY IIWNMKNIDE AIVGDTYSTI GSNVEALPGF SIPQSMVYVG AFPLDGSDYE 360
  361 RLNDNIEQLA LNDRAINVQK ENSSALGMGW RLGFLGTLHL SVFIDRLKDE YGKELLITSP 420
  421 TVPYRIKYKN GREEVISNPN LFPTNHQGIS ELLEPTVDAT IITPSEYLGD VIKLCESCRG 480
  481 LQKDCTYMSE SRCMIKYQLP LAHLVEDFFG RLKGTTSGFA TLDYEESDYV PADLVRLSIF 540
  541 MSGKSVDALC SIVHRSLALQ RGREWIQRLK PLVPKQLYEV ILQAVIDNRV VARESISALR 600
  601 KNVTAKCYGG DVTRKQKLLN KQKEGKKRLK SVGNVSIDKS VSNYIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..571] PSI-BLAST 104.0 Coordinates of RRF and EF-G fitted into Cryo-EM map of the 50S subunit bound with both EF-G (GDPNP) and RRF
    2 View Details [572..646] Pfam 13.337242 No description for PF06421.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle