Protein: | SPAC1B3.04c |
Organism: | Schizosaccharomyces pombe |
Length: | 646 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1B3.04c.
Description | E-value | Query Range |
Subject Range |
|
585.0 | [0..51] | [645..6] |
|
584.0 | [0..51] | [645..6] |
|
583.0 | [0..51] | [645..6] |
|
582.0 | [0..54] | [645..4] |
|
582.0 | [0..51] | [645..6] |
|
582.0 | [0..51] | [645..6] |
|
581.0 | [0..51] | [645..6] |
|
580.0 | [0..51] | [645..6] |
|
580.0 | [0..51] | [645..6] |
|
579.0 | [0..51] | [645..6] |
Region A: Residues: [1-571] |
1 11 21 31 41 51 | | | | | | 1 MSIFRLSRTF SLETCLKSSS FKIRWRFFSV SYASRKLASE DNKPSIQEVV RGIPQNRVRN 60 61 WAVIAHIDHG KSTLSDCILK LTGVINEHNF RNQFLDKLEV ERRRGITVKA QTCSMIYYYH 120 121 GQSYLLNLID TPGHVDFRAE VMHSLAACEG CILLVDASQG IQAQTLSNFY MAFSQNLVII 180 181 PVLNKVDLPT ADVDRTLIQV QQTFDIPMSK PILVSSKTGK NVEQILPEII QKIPPPKGSE 240 241 NAPLRCLLID SWYNSYQGVI GLVRIMEGFI KKGGKVMSVN TGRKYEVQQV GIMYPDMTEV 300 301 SRLRAGQVGY IIWNMKNIDE AIVGDTYSTI GSNVEALPGF SIPQSMVYVG AFPLDGSDYE 360 361 RLNDNIEQLA LNDRAINVQK ENSSALGMGW RLGFLGTLHL SVFIDRLKDE YGKELLITSP 420 421 TVPYRIKYKN GREEVISNPN LFPTNHQGIS ELLEPTVDAT IITPSEYLGD VIKLCESCRG 480 481 LQKDCTYMSE SRCMIKYQLP LAHLVEDFFG RLKGTTSGFA TLDYEESDYV PADLVRLSIF 540 541 MSGKSVDALC SIVHRSLALQ RGREWIQRLK P |
Detection Method: | ![]() |
Confidence: | 104.0 |
Match: | 1zn0B |
Description: | Coordinates of RRF and EF-G fitted into Cryo-EM map of the 50S subunit bound with both EF-G (GDPNP) and RRF |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [572-646] |
1 11 21 31 41 51 | | | | | | 1 LVPKQLYEVI LQAVIDNRVV ARESISALRK NVTAKCYGGD VTRKQKLLNK QKEGKKRLKS 60 61 VGNVSIDKSV SNYIA |
Detection Method: | ![]() |
Confidence: | 13.337242 |
Match: | PF06421.3 |
Description: | No description for PF06421.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.