Protein Overview: SPAC17H9.07

General Information:
Name(s) found:	SPAC17H9.07 [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	gi\|7492974\|pir\|\|T37873 probable signal recognition particle subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|3183357\|sp\|O13804\|YE07_SCHPO Uncharacterized protein C17H9.07 [NCBI NR] gi\|2330714\|emb\|CAB11216.1\| signal recognition particle subunit Srp21 (predicted) [Schizosaccharomyces pombe] [NCBI NR] gi\|19114489\|ref\|NP_593577.1\| signal recognition particle subunit Srp21 (predicted) [Schizosaccharomyces pombe] [NCBI NR] signal recognition particle subunit Srp21 [Sanger Pombe] Uncharacterized protein C17H9.07 OS=Schizosaccharomyces pombe GN=SPAC17H9.07 PE=2 SV=1 [Swiss-Prot] PUTATIVE SIGNAL RECOGNITION PARTICLE; SUBUNIT 9- LIKE; NO APPARENT S. CEREVISIAE ORTHOLOG: O13804; [pompepVF.fasta] SIGNAL RECOGNITION PARTICLE; SUBUNIT 9-LIKE: O13804; [pompepV13] Hypothetical protein C17H9.07 in chromosome I [pompep4896] \|\|\|putative signal recognition particle subunit [pompepnew.fasta] \|\|\|SRP receptor activity (predicted)\|Schizosaccharomyces pombe\|chr 1\|\|\|Manual [pombe041504.fasta] putative signal recognition particle subunit [Schizosaccharomyces pombe]gi\|2330714\|emb\|CAB11216.1\| SPAC17H9.07 [Schizosaccharomyces pombe]gi\|3183357\|sp\|O13804\|YE07_SCHPO Hypothetical protein C17H9.07 in chromosome Igi\|7492974\|pir\|\|T37873 probable signa [nrdb_11152004_Chlamydomonas] \|\|\|SRP receptor activity \|Schizosaccharomyces pombe\|chr 1\|\|\|Manual [pompep2242005.fasta] (O13804) Hypothetical protein C17H9.07 in chromosome I [pompep4896_normal_reversed] \|\|\|signal recognition particle subunit Srp21 \|Schizosaccharomyces pombe\|chr 1\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] SPAC17H9.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta] hypothetical protein SPAC17H9.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta] Uncharacterized protein C17H9.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17H9.07 PE=4 SV=1 [uniprot_sprot.fasta.20160308]
Organism:	Schizosaccharomyces pombe
Length:	120 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytosol [IDA] nucleolus [IDA] signal recognition particle, endoplasmic reticulum targeting [ISS]
Biological Process:	SRP-dependent cotranslational protein targeting to membrane [ISS] negative regulation of translational elongation [IEA]
Molecular Function:	7S RNA binding [IEA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MVYLQTVNEF FTQSKSLTEA YPKTTKLSIK YRTNEQSQNY LIAKAFESAS GICLKYRTDK 60 61 AAELGRLLLI ANKLSYVSTG NEIPPEPEQE VVASPVTEQK KAEPSAPPKG SKKKKRGKKK 120 121

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..120]	PSI-BLAST	25.69897	SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle