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Protein Overview: cid16

General Information:
Name(s) found: cid16 / SPAC17H9.01 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • poly(A) polymerase Cid16 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1202 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: polynucleotide adenylyltransferase activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFAKLLLKP VQILFAYAKA KSKEISIKEA NLLIFQDETD NLRKISTPNK LAVSLAGGLK  60
   61 ALLSSNQLCH AFHYHNKKIR LVDTSLNNLP VPILLPKLIN YLLARKSQKS AAEWEEIERA 120
  121 LLSCCKRSKD PSILFPTDVP CSLDDDVSFL TFKGHKNHLE NRSFFHDSES DNFKVVLSNC 180
  181 AINSKEDNNL VTEDRVNLGA KLLLVPVQNL IKLLKVSKIS VDLAVIDHSF QDQKLTLEVG 240
  241 NGGLEVVKLF GGWIRILESE CLGHVFSFKK TMKRKEVALV NRKADIDTTD LFIALRQLVD 300
  301 SKFKSYGIKA QKHAINRISK LGKMITSNHA EEKLTTIPIT EAKKESVSNT ALIARKNIIR 360
  361 ERKYLSRMFD IFEHIDSYFN HEINMLLVDL LLEPLQVAFV YKNLARRWIS LEEIENLWLK 420
  421 VFDSSHPLGK SITSTLQAIG TRKILTQLSI NMIPRYNQDN CSAGDIYILC FSENCWLYSV 480
  481 LQKTIDHWVN ENVELFYKKF EILKSLLIED IANSTFSKEV SLNSSLRWYC VAILVTPLQL 540
  541 IINHLKDKTE MLSLDAVMTL ILGKNTREVN SSIEELKITD CLSFLLEHNI FNTFLVYNEG 600
  601 IVKLNKDFDD FTPLNLLKCV NYSLMEFQKN STFDMLEKLY EIGREIDMSK FSTLKYNLQL 660
  661 PNVDLLKESE AVSETKNTKN NTFILKSDLK EEERLTNFTI EEINKHKAIG VALRKLLEEA 720
  721 DTSSNFSSSN NHVLDSSKHT VSSASTSSRK FIENYKSLES IGLTSFVKDN KLKASKELQK 780
  781 LIEENVFPKN LILFIFRKCV IGIKSFEKLQ SYVFTYYCER YPKLILKRVL RFLEEIGFIT 840
  841 SQYPRKLTDT GALFLKHPSE WGVLQHTFIS SNFFENVPCY ISLEQSLQNF QNDIRPDTVR 900
  901 TTAMKAIIKK LLKSLRKLEG PVKIACFGSY RTGLMTKNSD LDLVIYSSKE ALLPYYDRVK 960
  961 SIIKNEFSNV MPIRGARIPI IKFTGQYNIH CDLSFDNLLP IHNSDLILNY SLIDERVKTL1020
 1021 LMLVKYWASN RLIDKTHHAF PSSYTWCIMV IFYLQQIPEP ILPNLQKLST QYSKIVRDND1080
 1081 YGNVNCWFNR DTECYRGSMQ KGRKNIALLL RGFFCYYGLT TQYSFDWEAY MIDISSSQLK1140
 1141 RKSTEFKDCP FVVLDPFLKK KNLTKALTQK SVKVVRYELE RACRILSDPK CNLDHLLDPL1200
 1201 IQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..285] deduced N/A No confident structure predictions are available.
    2 View Details [286..332] deduced N/A No confident structure predictions are available.
    3 View Details [333..424] deduced N/A No confident structure predictions are available.
    4 View Details [425..921] PSI-BLAST 6.0 Botulinum neurotoxin
    5 View Details [922..1202] PSI-BLAST 46.045757 Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle