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Protein Overview: zip1

General Information:
Name(s) found: zip1 / SPAC25G10.03 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • transcription factor Zip1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: response to arsenic [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEA]
    response to cadmium ion [IGILink to PubMed article][IMPLink to PubMed article]
    [NOT]response to hydrogen peroxide [IMPLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: DNA binding [IEA]
    transcription factor activity [IEA]
    protein binding [IPILink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]
    cadmium ion binding [IEA]
    sequence-specific DNA binding [IEA]
    protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFTPNSAIN HLNLKFDDVP VSDDFSKDDL AEQLNVFTNP YFLDLEPSSM LSEGYYGFVS  60
   61 QPSGSSNSNK QEKNVQQQNP EKISTLQQVK EEEVSNTFSA PLNATGNFSS ANPASIDLAY 120
  121 LDLQKLLTLP DHSKETQEKT SSQRELFEQK SSVASASKDN VSSSSILQGS ASSKLLPDQS 180
  181 ARQHQVLVGQ TAIPTSEASS SINNTPLQAP VSSFADQNAF TNPLSTFASP DLASVSSPSL 240
  241 SSYKGAQSPN ANSKRTKATS AIRTAAEEDK RRRNTAASAR FRIKKKLKEQ QLERTAKELT 300
  301 EKVAILETRV RELEMENNWL KGLIRPTSNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] MSA 5.335994 View MSA. No confident structure predictions are available.
    2 View Details [197..251] deduced N/A No confident structure predictions are available.
    3 View Details [252..330] PSI-BLAST 15.69897 CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle