| Protein: | zip1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 330 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zip1.
| Description | E-value | Query Range |
Subject Range |
|
|
164.0 | [0..7] | [329..3] |
|
|
119.0 | [0..1] | [261..1626] |
|
|
118.0 | [0..1] | [261..1619] |
|
|
107.0 | [0..17] | [329..67] |
|
|
104.0 | [0..17] | [329..67] |
|
|
103.0 | [0..17] | [329..67] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MDFTPNSAIN HLNLKFDDVP VSDDFSKDDL AEQLNVFTNP YFLDLEPSSM LSEGYYGFVS 60
61 QPSGSSNSNK QEKNVQQQNP EKISTLQQVK EEEVSNTFSA PLNATGNFSS ANPASIDLAY 120
121 LDLQKLLTLP DHSKETQEKT SSQRELFEQK SSVASASKDN VSSSSILQGS ASSKLLPDQS 180
181 ARQHQVLVGQ TAIPTS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [197-251] |
1 11 21 31 41 51
| | | | | |
1 EASSSINNTP LQAPVSSFAD QNAFTNPLST FASPDLASVS SPSLSSYKGA QSPNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [252-330] |
1 11 21 31 41 51
| | | | | |
1 NSKRTKATSA IRTAAEEDKR RRNTAASARF RIKKKLKEQQ LERTAKELTE KVAILETRVR 60
61 ELEMENNWLK GLIRPTSNF
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1gtwA |
| Description: | CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER |
Matching Structure (courtesy of the PDB): |
|
