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Protein Overview: caf5

General Information:
Name(s) found: caf5 / SPBC609.04 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • spermine family transmembrane transporter Caf5 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 531 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Golgi apparatus [IDALink to PubMed article]
    plasma membrane [ISSLink to PubMed article]
    Biological Process: transmembrane transport [IEA]
    response to caffeine [IMPLink to PubMed article]
    polyamine transport [ISSLink to PubMed article]
    Molecular Function: spermine transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLRETVFG ELVEYVSHNS NDNDLEKLRV WKDISKVDSN DSCSSESGDL KIHEVNSEGH  60
   61 IIVRWDDAND PENPLNWPLW AKLVVTFDIC FLTFAVYVGS AIFTPGISEM QETMHVGTVP 120
  121 VVLGLTLFVL GYAIGPLILS PLSEIPQVGR QKIYVLSLLV FVCLQIPTAL GSSLGVLLPM 180
  181 RFLAGFFGSP ALATGGATLA DIWQPWLLPY FMCFWAIGAI GGPVLGPLLG GAMVVAESWR 240
  241 WQFWLLMMIS GFALIVIFFF MPETSEWHIL YKRAKRFRKI TGNENYRTEA ELASSHLSVA 300
  301 QLAKETIIRP IILSISEPIV LSLNIYIGLI YSILYLWFEA FPILFTSVYH FTIIENGLVY 360
  361 LGILVGALIT LACYFVFLYK VMIPAFMASG GDFAPEGVLV ISFPATFFIP ICLFWFGWSG 420
  421 RESVHWIVPI VSTLFYASGA FLMFQSMFQY LAASYPKYVA SVFAGNDLFR SAMAASFPLF 480
  481 ARAMFNNTGP SYAPVAWGST ILGIVACLMI PIPFVLHKWG LKLRSRSKYA S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..531] PSI-BLAST 29.221849 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.18173622457291 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.18173622457291 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  2.63293544825311 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.01584233411372 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle