YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC582.10c

General Information:
Name(s) found: SPBC582.10c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • ATP-dependent DNA helicase Rhp16b [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 830 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleotide-excision repair factor 4 complex [ISSLink to PubMed article]
    Biological Process: nucleotide-excision repair [ISSLink to PubMed article]
    Molecular Function: DNA binding [IEA]
    ATP binding [IEA]
    DNA-dependent ATPase activity [ISSLink to PubMed article]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKASKNKES GVKKANNSFL QNFGVNTAGK ENESTSLPRL PKSEDESIPK QSIKSKNKKK  60
   61 TQHFLSDAFE SLKRQEIDTN EKEVIVSAPI TSKPAQVFYS KKLERKDEGI RKWEKDPFAP 120
  121 ISVKSGAWKK PYTKVPEVSI NKATSKRTDL INDKPIVIPI PRASTSTLYF GKHNKPTSEN 180
  181 RKGPIGIPTE EILTSQNTQA MLHKLFENNV LDNVKDDSMQ RQSSFIPGMH IRLLDHQVQG 240
  241 LTWLKSRETV SKSSASGGIL ADDMGLGKTI QMIALILSHP LPKKKHSIKS TLVVAPLSLI 300
  301 KQWESEVQTK SKLTAIVYHG ASRYKLLKVI HEYDVVITTY QILVSEWVSH NTTGTDGKSP 360
  361 TEAKSYEKKK PSLFAFYWWR IILDEAHTIK NKSSKSALAC CALQGINRWC LTGTPLQNNV 420
  421 DELYSLVKFL HINPFNDQSV WKDQISLPLC QGEENLVFKR LRMLLSVIML RRTKTLLEAN 480
  481 AGKDGTGGAL KLSKRLVYKV ICKFEESERD FYSNLARNME RTMSNFVNSG KLGKNYTNIL 540
  541 CLLLRLRQAC NHPQSLNFQF EQDVDAFNAL DGAANTNKLA SDQDVDDLAN LLETVEIGSR 600
  601 KKSFCTICMA ELPPDFHEKK CKDCSRNFKE LDKGIQDPND KTLYKSSKIR EILKILSLDE 660
  661 QEEDDTVRGL RKTIIFSQFT TFLDIIDLHL RKAGIGFVRY DGRMNNRARE KSLDLLRSDS 720
  721 GTQVLLCSLK CGALGLNLTC ASRVILCDVW WNPAIEEQAI DRVHRIGQRR DVLVYKLVVE 780
  781 NTIEEKIVEL QNLKRDLAKQ ALGDGKKSVF TSKKLTLNDL LFLFNKRAAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] MSA 1.344993 View MSA. No confident structure predictions are available.
    2 View Details [102..225] deduced N/A No confident structure predictions are available.
    3 View Details [226..830] PSI-BLAST 41.045757 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle