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Protein Overview: SPAC4H3.03c

General Information:
Name(s) found: SPAC4H3.03c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • glucan 1,4-alpha-glucosidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    integral to membrane [IEA]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular polysaccharide metabolic process [ISS]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: glucan 1,4-alpha-glucosidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPNARVSYG AEKYLPREID NHGIVGNMHT SAMISLDGSV EMMCWPNFDS PSIFARILDA  60
   61 RAGHFSITPI EQTSCKQMYE PSTNILHTKF YSERGVLRLL DFFHRPWEDY EPLYPWLIRR 120
  121 VSCIRGTSRI KLECFPALDY ARQSHETRVS KITENYYQAE FVPASGDPKY ILDCVPSGDQ 180
  181 LKIDLELIYP AEHLIEGGGV ISYLELEEGQ EITFIFRQEG LGPNVDYVTP NLVDKLEDST 240
  241 KRYWRAWIQQ CVYTGRYREF VQRNALTLKL LIYEPTGAVI ASPTFSLPED LGGVRNWDYR 300
  301 FTWIRDSAFT IYALAQLGFR AEAVEYMSFI YHVLKKKNKD GGINIVYSIH GDSQNLEEVE 360
  361 LTHLRGYYNS HPVRIGNAAV HHLQLDIYGE LMDSIYIYDK KCQPIAYDLW LEVRQICDYV 420
  421 CANWKRPDKS IWEVRGQERN FLYSKIMLWV ALDRALRIAF TRSLPCPKHM VWMDTRDEIY 480
  481 EAIMDSGYNM EKGFFAQSFE NNDILDASVL VMPLVSFISP TDPRFLSTMD NIMKPLEKDG 540
  541 LMSNGLIFRY NNFVYEDGVG GDEGAFTMVC FWLVEALAMA GCSGYPKLLS TAVSMFEDLV 600
  601 RYSSHLQYYS EECSLSSESL GNSPQAFSSI AAIAAAHILD KALSIFNEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..649] PSI-BLAST 80.69897 Bacterial glucoamylase, C-terminal domain; Bacterial glucoamylase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.12652197038579 bayes_pls_golite062009
  • trehalase activity
    		•  0.847174589094813 bayes_pls_golite062009
  • catalytic activity
    		•  0.770933849734279 bayes_pls_golite062009
  • alpha,alpha-trehalase activity
    		•  0.711518852337884 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.68102716507433 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.473636146090495 bayes_pls_golite062009
  • isomerase activity
    		•  0.106573908779409 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle