YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC3F10.08c

General Information:
Name(s) found: SPAC3F10.08c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • rRNA processing protein Faf1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 259 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: rRNA processing [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENALLALQ RHFEDQFGHI EGLQPVSAKP SETAFNSDAS EKEQSPTTSN EEEDAISDME  60
   61 DKEDVSFGSK ILRVSHQEVE KPTLSATVGR VSFLKKMPKL EDEEEILAKK REEQKLRKRS 120
  121 RQNDDGSDDD EVENLKNDLE LQKLLRESHL LHEATSRTGQ VQLVAEGKIR HKVVQQHIAQ 180
  181 LGGKKETEKM PMAARRGMKK KQKHIEKVIE NEARESGTVL AKKRKERKQF KKGFRPVTFS 240
  241 APGKLVGGTL LLPKSMIPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 5.022996 View MSA. No confident structure predictions are available.
    2 View Details [129..259] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle