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Protein Overview: nsp1

General Information:
Name(s) found: nsp1 / SPAC26A3.15c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • nucleoporin Nsp1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 598 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nuclear membrane [IDALink to PubMed article]
    nuclear pore [IDALink to PubMed article]
    Biological Process: cell division [IMPLink to PubMed article]
    nucleocytoplasmic transport [TASLink to PubMed article]
    ribosomal subunit export from nucleus [ISS]
    Molecular Function: structural constituent of nuclear pore [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNPGNNQN SGFSFGKPAQ PNSAAQGAAT PAATGLFGNT NNNTSSTAPS GGLFGSNNAS  60
   61 NTSAPSTFSF GKAATTGNST NASTSSPFSF GSTNTNNTAG AKPLFGGLGS TGSANSTGDK 120
  121 SKNTASSATG AATTNPSGST FNFGSSNNSF NFGKPASTTN TTTPAAASTG SLFGKPAATG 180
  181 TTSNAPPASS TSTTPATGSG GFSFGKPASL GSTNNASTST TANSGFSFGK PATTSAPGSN 240
  241 TTVTPSSSIT GTNDSKPAAS NTGSAPTTGF SFGKPAGQAA STATDKGTTT TSSAGTGFSF 300
  301 GKPATTEDTN KPTAPNSAFT KPATSTGDNK PTFSFGNTSK PTENTSTTAT SAPPLSNNTK 360
  361 PAEGANQTSS GFSFGKPATD TTTSTSKTGP LFGNKPADPS AKPGATASTT PSEPPPSSIK 420
  421 HKTLQEILNK WSTDLTTQTE VFNKLCDQVS DWDRTLVDNG ALISKLYTET VEAEQMSNRI 480
  481 DDGLEYVSSS QQELFKLLDS YETQLETFDG RATSALNVER ERAFGVADDI LSRLDRLGED 540
  541 LGTVINQMND FSKPDDSISE IVKVLNAQLA SLGWVENRIF QMEEKLDTIK KKNSDVLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] MSA 10.141996 View MSA. No confident structure predictions are available.
    2 View Details [145..360] deduced N/A No confident structure predictions are available.
    3 View Details [361..598] PSI-BLAST 23.30103 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle