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Protein Overview: SPAC1D4.05c

General Information:
Name(s) found: SPAC1D4.05c [Sanger Pombe]
Description(s) found:
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  • pir||T38046 hypothetical protein SPAC1D4.05c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19113930|ref|NP_593018.1| Erd1 homolog [Schizosaccharomyces pombe] [NCBI NR]
  • gi|1723228|sp|Q10151.1|ERD12_SCHPO RecName: Full=Protein ERD1 homolog 2 [NCBI NR]
  • gi|1177338|emb|CAA93214.1| Erd1 homolog [Schizosaccharomyces pombe] [NCBI NR]
  • Erd1 homolog [Sanger Pombe]
  • Uncharacterized protein C1D4.05c - Schizosaccharomyces pombe (Fission yeast) [Swiss-Prot]
  • Protein ERD1 homolog 2 OS=Schizosaccharomyces pombe GN=SPAC1D4.05c PE=2 SV=1 [Swiss-Prot]
  • PROTEIN SIMILAR TO S. CEREVISIAE ERD1- PROTEIN REQUIRED FOR RETENTION OF LUMINAL ER PROTEINS: Q10151; [pompepVF.fasta]
  • Hypothetical protein C1D4.05c in chromosome I [pompep4896]
  • |||similar to S. cerevisiae ERD1 [pompepnew.fasta]
  • |||similar to S. cerevisiae YDR414C|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|1177338|emb|CAA93214.1| SPAC1D4.05c [Schizosaccharomyces pombe]gi|1723228|sp|Q10151|YAT5_SCHPO Hypothetical protein C1D4.05c in chromosome Igi|7490917|pir||T38046 hypothetical protein SPAC1D4.05c - fis [nrdb_11152004_Chlamydomonas]
  • (Q10151) Hypothetical protein C1D4.05c in chromosome I [pompep4896_normal_reversed]
  • |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC1D4.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC1D4.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||Erd1 homolog |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Protein ERD1 homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1D4.05c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 387 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISSLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: protein amino acid glycosylation [ISS]
    protein retention in ER lumen [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEVVEFPL HHKLALPFRI GLLVIVGTWL WSVCYHLIYI LNRYQPISPN PRGSLNSKWY  60
   61 HLLQIPLSNR HTDLEENTEF KANLVSPVDF HAGYCFAAIL SISWATGFIL FLKKTQGDIG 120
  121 GLYSHPIYPL LWVITAFILI VFPFPWRYRS SQRGLRKSII RVFLFFQADF RSPYKDFIVS 180
  181 EIFTSYAKAL GDFYIFGCVL QGHISKFTLR PDLKCDGTFF VPLAMAYPFI VAILQCLHYG 240
  241 LSRRKHTFKI NLLSALKHAT ALPVIYLSAI IHAKQTKFTL TSGHGYLFWL WILSALLSSA 300
  301 YTFLWDVFID WRIRFPFHKS INHKRFPMFI YAIGCFINFI LRVTWSMKLH PRLHQFHEYE 360
  361 MGIFSFEMLE ILRRFLWLFF HLDAISS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] deduced N/A No confident structure predictions are available.
    2 View Details [214..387] Pfam 76.69897 No description for PF03124.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle