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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC1D4.05c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEVVEFPL HHKLALPFRI GLLVIVGTWL WSVCYHLIYI LNRYQPISPN PRGSLNSKWY  60
   61 HLLQIPLSNR HTDLEENTEF KANLVSPVDF HAGYCFAAIL SISWATGFIL FLKKTQGDIG 120
  121 GLYSHPIYPL LWVITAFILI VFPFPWRYRS SQRGLRKSII RVFLFFQADF RSPYKDFIVS 180
  181 EIFTSYAKAL GDFYIFGCVL QGHISKFTLR PDLKCDGTFF VPLAMAYPFI VAILQCLHYG 240
  241 LSRRKHTFKI NLLSALKHAT ALPVIYLSAI IHAKQTKFTL TSGHGYLFWL WILSALLSSA 300
  301 YTFLWDVFID WRIRFPFHKS INHKRFPMFI YAIGCFINFI LRVTWSMKLH PRLHQFHEYE 360
  361 MGIFSFEMLE ILRRFLWLFF HLDAISS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle