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Protein Overview: SPAC3H1.10

General Information:
Name(s) found: SPAC3H1.10 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • phytochelatin synthetase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 414 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: phytochelatin biosynthetic process [ICLink to PubMed article]
    cellular response to stress [RCALink to PubMed article]
    response to cadmium ion [IMPLink to PubMed article]
    Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity [IMPLink to PubMed article]
    zinc ion binding [IEA]
    copper ion binding [IEA]
    cadmium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIVKRAVPE LLRGMTNATP NIGLIKNKVV SFEAVGQLKK SFYKRQLPKQ CLAFDSSLGK  60
   61 DVFLRALQEG RMENYFSLAQ QMVTQNEPAF CGLGTLCMIL NSLKVDPGRL WKGSWRWYDQ 120
  121 YMLDCCRSLS DIEKDGVTLE EFSCLANCNG LRTITKCVKD VSFDEFRKDV ISCSTIENKI 180
  181 MAISFCRKVL GQTGDGHFSP VGGFSESDNK ILILDVARFK YPCYWVDLKL MYESMFPIDK 240
  241 ASGQPRGYVL LEPMHIPLGV LTVGLNKYSW RNVSKHILQQ AATVKNADNL AEILLSINQS 300
  301 SIPLIQERSN SSKSGDFEHF KECIRSTKTY HLFLKHTNTN VEYITMAFWA IFSLPMIQKA 360
  361 LPKGVLEEIQ SLLKEVEISE INTQLTALKK QLDSLTHCCK TDTGCCSSSC CKNT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..265] PSI-BLAST 88.0 Crystal structure of Alr0975
    2 View Details [266..414] MSA 1.009976 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.36657034006611 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • protein binding
    		•  0.621642139747982 bayes_pls_golite062009
  • calcium-dependent cysteine-type endopeptidase activity
    		•  0.417947988325354 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.265677962366855 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  0.121546825626896 bayes_pls_golite062009
  • DNA binding
    		•  0.0914773013369659 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.035737338863812 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle