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Protein Overview: SPAC12G12.10

General Information:
Name(s) found: SPAC12G12.10 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • WD repeat protein, human WDR21 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 420 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Ddb1-Wdr21 complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLPFHIPG YYYNSEKKRY FRIISSGQST PSSNIYTKER LKRGKRFNNI SKERTKGKGG  60
   61 NPVFNFSTYL FDRQFSQYPY SCNDDRDYLC AKNLKKINLR QLPVGTELQK IGWLREVNTI 120
  121 ILTSKNGDIL GCCLTPEDKS GVANEKYTSE GSIQDFSLSR IGLSNNPISS LVCNAMQIFW 180
  181 STSPSLQNEG QFHISTYNQL LGESNNYRWG SLKLLKTPLC AESIGEMGFA VGGTSKIAII 240
  241 NREGKLTQSL QSKGDVFSLK YLGDNLVIAG CRNKSVLVYD LRTKKECVQR FYHGSSICSM 300
  301 QNLDFSQPKL LVSGLESKIS LYDCRFLQSK KRPQSIMSYM GHSNLLERNL ALMKNENGSI 360
  361 FSSAGDDYVL RFWKTDCSLP FKEMRVDDGK YLCRDGSWVK AMNGTGWVLP YGRGLLIYEP 420
  421

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..420] PSI-BLAST 41.69897 F-box/WD-repeat protein 1 (beta-TRCP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.04720267788917 bayes_pls_golite062009
  • protein binding
    		•  0.0109071915022965 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle