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Protein Overview: SPAC29E6.10c

General Information:
Name(s) found: SPAC29E6.10c [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • kinetochore protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1085 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDKALRTEA LSVGLEPPSF KDLLIPIPNS GTKKKNKKKK KPKAKKNVET QANVDLLGSA  60
   61 GTDSAVTDVG ANNGVIDHQA SLELSNLNSR ISHPQLVSAN GDDSSLINVE GISSTDWQFT 120
  121 LESDDTIEHS PQCILSTSSF VDEAEFPVHI PGLEDATSSN MSPNSVQNNM NLNTVALGSS 180
  181 TSSKRKKKKK KKSKANSASL NVDDQRDFEQ VYSTDVAITY RNGQALSYYN GSVRQASMNN 240
  241 NVNNNKSKDI WSSSNTEERE QIREFWLSLS ESERRSLVKV EKEAVLQKMK EQQKYSCSCS 300
  301 VCGRKRLAIE EELEVLYDAY YEELEQYANI QRNLANTESV NASDEGSDKS QKGIISDSPK 360
  361 LLSIPLNNVP SKSLNDDITQ DELNSSNADV DEEVIETTSL EEKNVDNQEF VTSISNGNQT 420
  421 LEDTSHSPQT QPPFQPPYPS KADEKNSYHS DLYNFGSSLT VKGGILTVAD DLLKNDGKKF 480
  481 IEMMEQLAER RMQREDNSNF HEPELYESGL EYDEDEEEDE EDVDEDELDL MTDEQRMEEG 540
  541 RRMFQIFAAR LFEQRVLQAY REKVAQQRQA KLLEEIEEEN KRKQERELKK IREKEKKRDK 600
  601 KKQLKLAKEE ERQRREAERL AEQAAQKALE AKRQEEARKK REEQRLKREQ EKKQQELERQ 660
  661 KREEKQKQKE REKKLKKQQQ EADREKMARE QRLREEEEKR ILEERKRREK LDKEEEERRR 720
  721 RELLEKESEE KERRLREAKI AAFFAPNQTK EGSDGCTTSS QLGLFEKKGD LVNDEDKLSS 780
  781 HLLDSVPNAL RQAPIGLKNT NNLSERNASS NLLNSSLFSS FNSVNPLISL EPNPLNRTLN 840
  841 NSVNLTDFGR KPNGLHSPSS LLSNSNNFGL NPNARHSLSR ANSPVHHYPF ATPPSQRANK 900
  901 YPLNNGANVP ALLNSFSSPQ LSPLVNRVLN EPSSSPLSSS SLKSPLSKEG VLNQQGHEQY 960
  961 NFSLSPSIRN KLSPICRPSQ GSSPKLKNNL SNTEERMGSR ALLDDKTDSV ITASNSTTSG1020
 1021 LSRDESSNPN NYELLNAFNQ NTWKISRSTS NKSLIPESPW GVALGAFTPN ASTQSIPWGN1080
 1081 RTWTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)
    View Run dam1 No Comments Liu X, et al. (2005)
    View Run dam1 No Comments Liu X, et al. (2005)
    View Run spc19 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..428] PSI-BLAST 4.522879 No description for 2dfsA was found.
    2 View Details [429..605] FFAS03 0.957 No description for 2qagB was found.
    3 View Details [606..888] PSI-BLAST 10.522879 Heavy meromyosin subfragment
    4 View Details [889..1085] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle