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Protein Overview: nup146

General Information:
Name(s) found: nup146 / SPAC23D3.06c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • nucleoporin Nup146 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1325 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear membrane [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [TASLink to PubMed article]
    Biological Process: cell division [IMPLink to PubMed article]
    nucleocytoplasmic transport [TASLink to PubMed article]
    rRNA export from nucleus [ISS]
    Molecular Function: protein binding [IPILink to PubMed articleLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAENTFSIL NTNEPNAGGS QVTESEIEEE DIEFLSFAAL KIGATSSLSN SSLGLPEYSN  60
   61 LFAINNLKSL FVAGVPNYLI IGSTLDLQKS LIDADENVDA NVLKDSASIR HVSLPDAKFS 120
  121 MVSFSSNGEF VIAYDFVSFE LSVYETDALL KNSATSIYKA VFPDLVQVLP NPEINNLVIL 180
  181 RNLKLEVFLL SLSKFQVESP LAKDATCAAW SRRGKQCVIG FNNGTMSQYT PAGEIKLRIP 240
  241 RPPSLENYFV ECISWIENRE FVVFYSPLTS LSNESDEPPH ESECFVISVG MNGHFNFGKA 300
  301 GDPTPPFGAV NRRDHHYIAS LHAWKPDLRS LVVVANTASA DLGVLALSME KNQWSILNIV 360
  361 DETKRASLPY SNKKDSDSSP TALVMDFTAT DRISKPLDPT EAPADCSPLP IVWVFNDEFQ 420
  421 LVAYRIFYAD AISKSIDYPE MNVIKDKNKD STVRASNNEN IPTPDKQASP FVKNLSSTSS 480
  481 PFSQSSAFGN FKFGQATSFD KGLSTDASSG AKSNTPVFGQ PSTFGQAPVF GQPSAFGQAP 540
  541 VFGQPSAFGQ SSFSFGTSNM NQKLDFGTFK SPLSGAATGE AKTNLEKAVT SASGKASFTG 600
  601 FAPSQSTTSG LNFDSIPKDN EAASIFGSSQ VSTKNTSGFQ FSNNTLLADN VDEDIESDHD 660
  661 TKIEELANSD VEPSTEQNIG GDVSWGASTF QSKPQPSFSF GLTLDDKSNT PGKNFSIFGK 720
  721 TAETQVEQKK PENNVLTKPF SFAPSDKSMF AANIPSAGEG LDQQKTSKAL PSTGITKLSE 780
  781 NDNEKAEESN ETKGFNTTIA KQNDKSSKSE GKASVANMSA LNKSTNNETS DSKPSLKSPL 840
  841 FNFSADAPTF TFNKPSETPP FSFNKPLVEK ESKQDVSDTS DRSPFSFKAF GIDSKKSPTP 900
  901 EPTEMAESNI SEESEGWKLI EQPNVESEIE DQDEESSDLN GKRRSTPPKI HEVGVNKMLD 960
  961 VVPKEKRDLN SFFPKQPLVV QSTDKNKKEP QESLEDEILS AEGFSEVEAA NKISRFEPFS1020
 1021 SPKLKLATSD NAPEKYVFEE SESSDLEEGP VPLRNLESLA DLPEAESNEK LPMVNTFERL1080
 1081 YLQFKNELDL VWQNINIIAE YIEGQTSTPS AVSEQATMAM LSQNTEELED LLDTVTSFSA1140
 1141 FCSDYSKQID YLEACLVRIN AKRIQVTRLL KALTNPAFEK QMELRQLGPE ALRRQKELRL1200
 1201 KMEKVLKSLS TLEQQAVDAR MSDTRRFKKP TLGSIEVAYS RIATLLGQRL KQLYKLEKDI1260
 1261 KRMATKKKMI TKKSMSSDMM TQFRALGISQ SSTKQVSAHY LREFERQDAF RNGVFKRLTS1320
 1321 LKKAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 77.69897 No description for 2oitA was found.
    2 View Details [270..921] PSI-BLAST 9.0 No description for 1y0fA was found.
    3 View Details [922..1262] PSI-BLAST 33.154902 Heavy meromyosin subfragment
    4 View Details [1263..1325] PSI-BLAST 18.69897 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle