| Protein: | nup146 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1325 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nup146.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..832] | [1325..1206] |
|
|
325.0 | [0..832] | [1325..1262] |
|
|
324.0 | [0..832] | [1325..1262] |
|
|
323.0 | [0..832] | [1325..1258] |
|
Region A: Residues: [1-269] |
1 11 21 31 41 51
| | | | | |
1 MNAENTFSIL NTNEPNAGGS QVTESEIEEE DIEFLSFAAL KIGATSSLSN SSLGLPEYSN 60
61 LFAINNLKSL FVAGVPNYLI IGSTLDLQKS LIDADENVDA NVLKDSASIR HVSLPDAKFS 120
121 MVSFSSNGEF VIAYDFVSFE LSVYETDALL KNSATSIYKA VFPDLVQVLP NPEINNLVIL 180
181 RNLKLEVFLL SLSKFQVESP LAKDATCAAW SRRGKQCVIG FNNGTMSQYT PAGEIKLRIP 240
241 RPPSLENYFV ECISWIENRE FVVFYSPLT
|
| Detection Method: |  |
| Confidence: | 77.69897 |
| Match: | 2oitA |
| Description: | No description for 2oitA was found. |
|
Region A: Residues: [270-921] |
1 11 21 31 41 51
| | | | | |
1 SLSNESDEPP HESECFVISV GMNGHFNFGK AGDPTPPFGA VNRRDHHYIA SLHAWKPDLR 60
61 SLVVVANTAS ADLGVLALSM EKNQWSILNI VDETKRASLP YSNKKDSDSS PTALVMDFTA 120
121 TDRISKPLDP TEAPADCSPL PIVWVFNDEF QLVAYRIFYA DAISKSIDYP EMNVIKDKNK 180
181 DSTVRASNNE NIPTPDKQAS PFVKNLSSTS SPFSQSSAFG NFKFGQATSF DKGLSTDASS 240
241 GAKSNTPVFG QPSTFGQAPV FGQPSAFGQA PVFGQPSAFG QSSFSFGTSN MNQKLDFGTF 300
301 KSPLSGAATG EAKTNLEKAV TSASGKASFT GFAPSQSTTS GLNFDSIPKD NEAASIFGSS 360
361 QVSTKNTSGF QFSNNTLLAD NVDEDIESDH DTKIEELANS DVEPSTEQNI GGDVSWGAST 420
421 FQSKPQPSFS FGLTLDDKSN TPGKNFSIFG KTAETQVEQK KPENNVLTKP FSFAPSDKSM 480
481 FAANIPSAGE GLDQQKTSKA LPSTGITKLS ENDNEKAEES NETKGFNTTI AKQNDKSSKS 540
541 EGKASVANMS ALNKSTNNET SDSKPSLKSP LFNFSADAPT FTFNKPSETP PFSFNKPLVE 600
601 KESKQDVSDT SDRSPFSFKA FGIDSKKSPT PEPTEMAESN ISEESEGWKL IE
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [922-1262] |
1 11 21 31 41 51
| | | | | |
1 QPNVESEIED QDEESSDLNG KRRSTPPKIH EVGVNKMLDV VPKEKRDLNS FFPKQPLVVQ 60
61 STDKNKKEPQ ESLEDEILSA EGFSEVEAAN KISRFEPFSS PKLKLATSDN APEKYVFEES 120
121 ESSDLEEGPV PLRNLESLAD LPEAESNEKL PMVNTFERLY LQFKNELDLV WQNINIIAEY 180
181 IEGQTSTPSA VSEQATMAML SQNTEELEDL LDTVTSFSAF CSDYSKQIDY LEACLVRINA 240
241 KRIQVTRLLK ALTNPAFEKQ MELRQLGPEA LRRQKELRLK MEKVLKSLST LEQQAVDARM 300
301 SDTRRFKKPT LGSIEVAYSR IATLLGQRLK QLYKLEKDIK R
|
| Detection Method: | |
| Confidence: | 33.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1263-1325] |
1 11 21 31 41 51
| | | | | |
1 MATKKKMITK KSMSSDMMTQ FRALGISQSS TKQVSAHYLR EFERQDAFRN GVFKRLTSLK 60
61 KAD
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
