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Protein Overview: SPAC16C9.03

General Information:
Name(s) found: SPAC16C9.03 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • export adaptor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 498 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleoplasm [IEA]
    Biological Process: ribosomal subunit export from nucleus [ISSLink to PubMed article]
    ribosomal large subunit assembly [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMDSGSMGV AFQPSEPIAS TILCCECGVP TPPNAAAMCM DCIKMTTDIT SGIPRESTVN  60
   61 HCRECERYMQ PPNNWMIAPL ESRELMAICL KKLRGLNQVR LVDANFIWTE PHSRRIKVKL 120
  121 TVQKEAFTNT ILQQSFQVEF YVNNTQCPDC ARTYTPHIWK AVCQVRQKVL HKRTFLYLEQ 180
  181 IILKHKAHMN TVNIKETKDG IDFYFGQRAH AIKMVEFLSA VVPIRYKGSE ELISEDFKSN 240
  241 TANYKFTYSI EIVPICKDDL VCLPKTVAKA HGNIAQLVVC TKVGPTIRFL DPLTLQTCDM 300
  301 LPSIYWRTPF PALADIPELT EFIVADVDLL GPTNGKYALA DVELIKSSDG STHLTRTHLG 360
  361 GILNAGNTVL AYHLAVTNFN NEVYDTLRED SIPEVVIVKK TYPQTKKKNR NWRLKTIGMQ 420
  421 KAEDVKKQDI ERQERDYELF LQNLEEDPEL RQGVNLYKAP VKAIAVADTD MDEEDEVDED 480
  481 IPQISVDELL DDVEAMHI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] MSA 1.033986 View MSA. No confident structure predictions are available.
    2 View Details [109..257] MSA 1.034988 View MSA. No confident structure predictions are available.
    3 View Details [258..446] deduced N/A No confident structure predictions are available.
    4 View Details [447..498] MSA 1.012996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle