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Protein Overview: SPAC13G6.15c

General Information:
Name(s) found: SPAC13G6.15c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • calcipressin [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 163 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: negative regulation of calcium-mediated signaling [NASLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    calcium-mediated signaling [ISSLink to PubMed article]
    Molecular Function: calcium-dependent protein serine/threonine phosphatase regulator activity [ISSLink to PubMed article]
    protein phosphatase 2B binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVFTTSPDH VDELNEFVQQ LNPVAFTRVL RGLGKVLASY NDKAVEEDTL KKSSTGSLPS  60
   61 GQQVHCQYVL DDPNHVEGIS VDQSLQVPKF EKNWLISPPG SPPVGWEPIV EESPNSQHLA 120
  121 HDIQLKLDEL GNALLNDHSA GPQIVISEHN NTKETSPSRQ FEH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run spc19 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 26.522879 Solution structure of RRM domain in calcipressin 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.64400841800969 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.18221750600272 bayes_pls_golite062009
  • RNA binding
    		•  2.25701618391425 bayes_pls_golite062009
  • protein binding
    		•  1.12215421354121 bayes_pls_golite062009
  • mRNA binding
    		•  1.01333229070461 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.400831329848221 bayes_pls_golite062009
  • DNA binding
    		•  0.341018037712367 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle