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Protein Overview: vps35

General Information:
Name(s) found: vps35 / SPCC777.13 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • retromer complex subunit Vps35 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 785 amino acids

    Gene Ontology:
    Cellular Component: endosome [IMPLink to PubMed article]
    retromer complex [IMPLink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    intracellular protein transport [IMPLink to PubMed article]
    retrograde transport, endosome to Golgi [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNSALTPKQ YYELYMFNME SLRLLGGTLL ETHLNGTHNL MDLYELVQYA GSIVPRLYLM  60
   61 ITVGSAYLET PNALVREIMN DLLDMCRGVQ HPLRGLFLRH YLLTQTRKGL PLGSEDEEDA 120
  121 SRKGTVLDSV KFLVINFTEM NKLWVRIQHL GPIKEFSKRT QERNELKVLV GLNLVRLSQL 180
  181 NLDIDTYRDH VLPAIIEQII ECRDSLAQEY LVEVICQAFS DNMHLQTLDT YFGTVIKLSP 240
  241 SVNVTQLVVA MLNRLTDYVQ REYESDSSNE DESETVTEKL GDIKINEEVQ QKDEQECPGD 300
  301 KVIPPEYAIQ EVLWSHVVEV IQSRSGLPLD CIVSILSSIL NFFLRCYPYK PQYADRVFQY 360
  361 INEHIINQPS LRSALHERPL QKSLCAILLL PLTYFPSFSY CLELQNFLPV FNAQDPNLRY 420
  421 DIARMIVQKI IEKGHSLSEL TEAQELLGFV SVIIEKKGVD SLDDLQNVAL MVHYLNNDDP 480
  481 QIQIEILRSL KDTFIKAGEN VKYLLPVVVN RCIFLARNFR IFKCMDWAEK VRLLWEFVNT 540
  541 CINVLYKNGD SLELCLALYL SAAEMADQEN YPDFAYEFFT QAFSIYEESV LDSELQYQQL 600
  601 LMIIGKLQKT RNFSVDDYDT LITKCTLYAS KLLKKPDQCC GIYLASHLWW QVASGEDSRP 660
  661 FQDPKRVLEC LQKSLKIADA CMDQLTSLKL FINILERYFY YYDQHCESII AKHISGLIDL 720
  721 TEQNMRSILI SSPADLIASD PRAYASSIWE VANVSVIDSL KNHLERATAY AEKRSEDERW 780
  781 SSIFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..785] FFAS03 1.0 Crystal Structure of The Cand1-Cul1-Roc1 Complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle