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Protein Overview: vma8

General Information:
Name(s) found: vma8 / SPCC965.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • V-type ATPase subunit D [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    vacuolar proton-transporting V-type ATPase complex [ICLink to PubMed article]
    fungal-type vacuole membrane [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ATP hydrolysis coupled proton transport [ICLink to PubMed article]
    vacuolar acidification [TASLink to PubMed article]
    Molecular Function: ATP binding [ICLink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKQRENVF PTRMTLTTMK TRLKGAQTGH SLLKRKSEAL KKRFREIVVN IEQAKQKMGR  60
   61 VMQIAAFSMA EVGFAMGNNI NFEIQQSVKQ PRLRVRSKQE NISGVFLPTF EMNLDESIDD 120
  121 FQLTGLGKGG QQIQKARQVY EKAVETLVQL ASYQSAFVLL GDVLQMTNRR VNSIEHIIIP 180
  181 RLENTIKYIE SELEELERED FTRLKKVQKT KENAEKADSV TKEEHQGGSN TLQQTKDVGG 240
  241 AIAPAAEVGK EVINEVENSK DDTYSLPSTS TDDEEENDSD EEVIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..285] Pfam 104.744727 No description for PF01813.8 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle