YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: vma1

General Information:
Name(s) found: vma1 / SPAC343.05 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • V-type ATPase subunit A [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: vacuolar proton-transporting V-type ATPase, V1 domain [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ATP hydrolysis coupled proton transport [ISSLink to PubMed article]
    vacuolar acidification [IMPLink to PubMed article]
    endocytosis [IMPLink to PubMed article]
    ATP synthesis coupled proton transport [IEA]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [TASLink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGIELAKK AIRSLKNYDE HENRYGSIFS VSGPVVVAAN MLGCSMYELV RVGHEELVGE  60
   61 VIRIHQDKCT IQVYEETSGL TVGDPVQRTG KPLSVELGPG LAETIYDGIQ RPLKQIFDKS 120
  121 QSIYIPRGIN TESLNREHKW DFTPNKDLRI GDHVSGGDVF GSVFENSLFN DHKIMLPPRA 180
  181 RGTVTYIAEA GSYHVDEKLL EVEFNGKKHS FSMLHTWPVR AARPVADNLT ANQPLLTGQR 240
  241 VLDALYPCVQ GGTTAIPGAF GCGKTVISQS LSKYSNSDLI VYVGCGERGN EMAEVLMDFP 300
  301 ELTIDINGKP EPIMKRTTLV ANTSNMPVAA REASIYTGIT LAEYYRDQGK NVSMMADSTS 360
  361 RWAEALREIS GRLAEMPADS GYPAYLGAKL ASFYERAGRA RCLGSPDREG TVSIVGAVSP 420
  421 PGGDFSDPVT SATLGIVQVF WGLDKKLAQR KHFPSINTSL SYSKYINALQ PWYEERVPGF 480
  481 NTLRDQIKQI IQQEDSMLEI IQLVGKSALS ETDKVTLDIA GIIKNDFLQQ NGYSDYDRCC 540
  541 PLYKTYHMMR NMIAYYTKAK SAVETGSVPW SKIKESTSDI FYELTSMKFE NPNEGEKEIV 600
  601 EHYETLHKKI EDKFHTLTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..619] PSI-BLAST 133.0 Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle