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Protein Overview: ufd2

General Information:
Name(s) found: ufd2 / SPAC20H4.10 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • ubiquitin-protein ligase E4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1010 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    ubiquitin ligase complex [IEA]
    cytoplasm [IDALink to PubMed article]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    protein ubiquitination [IEA]
    Molecular Function: ubiquitin-protein ligase activity [IEA]
    ubiquitin-ubiquitin ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLEKIRLK RLAKLQQTNS EANSSKEPKE SNIAPEPKKP DLKKRFIGSK ATTSNSEQKE  60
   61 ISPPVTSGAP KHRLFSKDEW MHFITCQALN ITLSETDSSK YYLEGFKKDL EEEGSPLLFN 120
  121 ENNVDSALLS RLSTTGNNTF SYLLQSWSFL YQYKKRLPKD ENQDFKIHYL SLLKSLLVSY 180
  181 AGIVVMLPDT FNSETIDLAE VLIGAEGIPL EFLSEFVQRF EHENLDELFI PVLESLSLKI 240
  241 GLMNVDTVQM NVMQIILQLV SLKPIALLLP KLPSWNPTNN AGEIEYKTFL GRISSLSVFT 300
  301 QDVASRYFSN STERSAQNIS SSISSLKLTM STYQDVLFQI FNTLIRTSTS LRESVLDFFA 360
  361 MVVNANHKRQ SIQVNHFDIT SDACMLNFSH VLSRLSEPFL DIGCSKIDRV QVEYFRRNPR 420
  421 VDIKEETKLN ADQKASESFY SKPAEGSNNF ISDIFFLNLA FHHYGVNATF KALEQLVQSI 480
  481 RDSEKLKERL ETEQQNMSGS FQATRLTAQL SRLDQRLDLD RSFVHCYEIM LTQTSDTSRS 540
  541 FSFLNFVAIW LSRLADGQSS TYPKMPLSLP FNENAPEAFK CLPEYFIETI TDYMLSLFKT 600
  601 SSSTLTLHSL EPLCEFCVSF LTQANYIKNP YLRAKLAEIL YFGVQTHVGR SELLLDVVRT 660
  661 SKVATRWLLP ALMAFYIEIE STGQSTQFYD KFNIRFYICE VFRTIWKQPA YFGKLEQEQK 720
  721 TNLPFFVKFV ALMLNDATYL LDEALLKLTE IHNLQSLLAD AISNSNSNQN VQESQSNLAA 780
  781 AERQASTYCQ LGNETIFMLK LFTSSIPKAF CAVEIVDRLA AMLNYNLQAL CGPKCSNLKV 840
  841 EDPTKYHFNA KTLLSIIFDV YLNLCNEPAF VEAVAHDGRS YSKEIFERAT SIMTKHNLKS 900
  901 SFDIEAIKEF VNRVEAFRLQ EATEEEDMGD IPDYFLDPLM FTIMKDPVVL PRSGISIDRS 960
  961 TIKAHLLSDA TDPFNRTPLT LDDVTPNDTL REEINTFLKS KRNKHSRNSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] deduced N/A No confident structure predictions are available.
    2 View Details [76..1010] PSI-BLAST 1000.0 No description for 2qizA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle