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Protein Overview: ubp21

General Information:
Name(s) found: ubp21 / SPBC713.02c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ubiquitin C-terminal hydrolase Ubp21 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1129 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of protein kinase activity [IGILink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: ubiquitin thiolesterase activity [ISSLink to PubMed article]
    cysteine-type peptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSNVDAEE VNMDSSMELE ESSQEPLRAD NYEEIYNSLV HHEPDLEEAA HASYSWVVKN  60
   61 FSTLEDKTYS PLFKAGHTTW RIVLFPKGCN QTEYASVFLE YLPQCKVEAI RKYEAELAAG 120
  121 KTPTIDPEIV NDETYSCCAQ FALSLSNVQD PTVMQINTSH HRFRSEVKDW GFTRFVDLRK 180
  181 IAVPTPEFPV PFLENDEICI SVTVRVLQDP TGVLWHSFVN YNSKKETGYV GLKNQGATCY 240
  241 MNSLLQSLFF TNIFRKTVYK IPTDNDDSRD SVAYALQRVF YNLEKQREPV STTELTRSFG 300
  301 WNSFDSFMQH DIQEFNRVLQ DNLEKKMKGT EVENALNDIF VGKMKSYVKC IDVNYESSRV 360
  361 EDFWDIQLNV KGMDTLEDSF RDAIQVETLT GDNKYYAEGH GLQDAHKGII FESLPNVLQL 420
  421 QLKRFDYDML RDMMVKINDR HEFPLEIDLE PYLSETADKS ESHVYVLHGV LVHGGDLHGG 480
  481 HYYALIKPEK DSNWFKFDDD RVTRATIKEV LEDNYGGEPA GRAKGYNGNP FKRFMNAYML 540
  541 VYFRKSRLDH ILSPVTAEDV PFHVRNTLDE EHRVVERKLL EREEQQIYRR VRVLTTDGFK 600
  601 KYHGFDMTDF SASDDDPVLI TTKIKRNANI WDLQKHLAGL LNRDTSGIRI WLMTNRQNRT 660
  661 VRVDLPLDKK TILVDQICDM HIRKDMDMRV YVEFLSEHNQ LLADFGATDD NDFDTYIFLK 720
  721 IFDYETQQIS GLADLHVSKN SPISSLSEWI REHLKWSSDV PITYYEEIKT GMVDVLDPNA 780
  781 SFEKSEIQVG DIICFEKKLV HDSSSDTSHP YKSALDLYDF MAHRVVITFE PRYSDDTNNG 840
  841 VFDLVLTTHT NYTDMARAVA NKLNVDPNYL QFTMAHLPSR TPRSVIRNPS KFTLQNAIPS 900
  901 TYSHNQNVVM FYEVLDITLS ELERKQLIRV HFLSNGISHE TQMEFYVDKE GTVEDILRQV 960
  961 TQKVPLNAED ASRLRLYEVY NHRILKSHLP TDGIYDLNEF STAYVEVTPK EEQMQLKTDD1020
 1021 AVSIVVQHFF KDLSRLHDIP FYFVLLRGET LKDLKKRLQK RLGYNDTQFS KVKLAVLQAQ1080
 1081 SFGKPYYLTD DDEVLYGELE PQSHILGLDH PPANGSAQYH GMDQAIRMK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..590] PSI-BLAST 92.69897 Crystal structure of HAUSP
    2 View Details [591..664] deduced N/A No confident structure predictions are available.
    3 View Details [665..1129] FFAS03 2.39 No description for 2ibiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle