| Protein: | ubp21 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1129 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubp21.
| Description | E-value | Query Range |
Subject Range |
|
|
1071.0 | [0..1] | [1129..1] |
|
|
912.0 | [0..16] | [1123..77] |
|
|
912.0 | [0..19] | [1129..15] |
|
|
902.0 | [0..2] | [1128..17] |
|
|
891.0 | [0..4] | [1123..56] |
|
Region A: Residues: [1-590] |
1 11 21 31 41 51
| | | | | |
1 MVLSNVDAEE VNMDSSMELE ESSQEPLRAD NYEEIYNSLV HHEPDLEEAA HASYSWVVKN 60
61 FSTLEDKTYS PLFKAGHTTW RIVLFPKGCN QTEYASVFLE YLPQCKVEAI RKYEAELAAG 120
121 KTPTIDPEIV NDETYSCCAQ FALSLSNVQD PTVMQINTSH HRFRSEVKDW GFTRFVDLRK 180
181 IAVPTPEFPV PFLENDEICI SVTVRVLQDP TGVLWHSFVN YNSKKETGYV GLKNQGATCY 240
241 MNSLLQSLFF TNIFRKTVYK IPTDNDDSRD SVAYALQRVF YNLEKQREPV STTELTRSFG 300
301 WNSFDSFMQH DIQEFNRVLQ DNLEKKMKGT EVENALNDIF VGKMKSYVKC IDVNYESSRV 360
361 EDFWDIQLNV KGMDTLEDSF RDAIQVETLT GDNKYYAEGH GLQDAHKGII FESLPNVLQL 420
421 QLKRFDYDML RDMMVKINDR HEFPLEIDLE PYLSETADKS ESHVYVLHGV LVHGGDLHGG 480
481 HYYALIKPEK DSNWFKFDDD RVTRATIKEV LEDNYGGEPA GRAKGYNGNP FKRFMNAYML 540
541 VYFRKSRLDH ILSPVTAEDV PFHVRNTLDE EHRVVERKLL EREEQQIYRR
|
| Detection Method: |  |
| Confidence: | 92.69897 |
| Match: | 2f1zA |
| Description: | Crystal structure of HAUSP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [591-664] |
1 11 21 31 41 51
| | | | | |
1 VRVLTTDGFK KYHGFDMTDF SASDDDPVLI TTKIKRNANI WDLQKHLAGL LNRDTSGIRI 60
61 WLMTNRQNRT VRVD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [665-1129] |
1 11 21 31 41 51
| | | | | |
1 LPLDKKTILV DQICDMHIRK DMDMRVYVEF LSEHNQLLAD FGATDDNDFD TYIFLKIFDY 60
61 ETQQISGLAD LHVSKNSPIS SLSEWIREHL KWSSDVPITY YEEIKTGMVD VLDPNASFEK 120
121 SEIQVGDIIC FEKKLVHDSS SDTSHPYKSA LDLYDFMAHR VVITFEPRYS DDTNNGVFDL 180
181 VLTTHTNYTD MARAVANKLN VDPNYLQFTM AHLPSRTPRS VIRNPSKFTL QNAIPSTYSH 240
241 NQNVVMFYEV LDITLSELER KQLIRVHFLS NGISHETQME FYVDKEGTVE DILRQVTQKV 300
301 PLNAEDASRL RLYEVYNHRI LKSHLPTDGI YDLNEFSTAY VEVTPKEEQM QLKTDDAVSI 360
361 VVQHFFKDLS RLHDIPFYFV LLRGETLKDL KKRLQKRLGY NDTQFSKVKL AVLQAQSFGK 420
421 PYYLTDDDEV LYGELEPQSH ILGLDHPPAN GSAQYHGMDQ AIRMK
|
| Detection Method: | |
| Confidence: | 2.39 |
| Match: | 2ibiA |
| Description: | No description for 2ibiA was found. |
