YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ubp6

General Information:
Name(s) found: ubp6 / SPAC6G9.08 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • ubiquitin C-terminal hydrolase Ubp6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 467 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    proteasome regulatory particle [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: protein deubiquitination [ISSLink to PubMed article]
    ubiquitin-dependent protein catabolic process [ICLink to PubMed article]
    Molecular Function: ubiquitin-specific protease activity [ISSLink to PubMed article]
    ubiquitin thiolesterase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPIAIRWQG KKYDLEIEPN ETGSTLKHQL YSLTQVPPER QKVIVKGGQL KDDVLLGSVG  60
   61 IKPNATLLMM GTAGELPTAM PIPAVESVEQ EESEDDGYPS GLINLGNTCY MNSTVQMLRA 120
  121 IPELSDAVSQ FNSSGGLVAE YRTLLNSMQS NAPVTPMRFL QSLRMEYPQF AEMSRETGGY 180
  181 AQQDAEECWS FLLSVLQRSL SSEWVQKNMA GKLLSTMKCD ENEVQEQPSI SHDTFLSLPC 240
  241 HISMHTSYMT QGILEGLTQK ISKHSDVLNR DAMYSKISRI SRLPNYLTVN FVRFYWKASI 300
  301 GKKAKILRKV KFPFELDAVE FCTPELSQKL IPVRDKLREI EKNDEEHERA AKRIKIQPSE 360
  361 DEKEAEAECR LTQVATCQSL VDPELADDEG ANPTGLYDLV GVLSHAGASA SSGHYQAWIR 420
  421 NSNNRAEWFR FNDAKVSIVP AEKIETLDGG GEADSAYILL YKAKDIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..397] PSI-BLAST 34.0 Crystal structure of HAUSP
    2 View Details [398..467] PSI-BLAST 42.09691 Structure of USP14, a proteasome-associated deubiquitinating enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle