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Protein Overview: trp4

General Information:
Name(s) found: trp4 / SPBC16G5.08 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • phosphoribosylanthranilate transferase Trp4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: tryptophan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: anthranilate phosphoribosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINTFNPEVR LAIHDLDKVG PAIPLENYEA ALRAILTGKA SPVETASFLA SLHLTKAEEV  60
   61 PDILMQTVQI LKSYSTPIAN IEMVSPRFVD IVGTGGDGHN TFNVSTASAI VAAGAGLWVC 120
  121 KHGNKASTSA SGSADLLMSF GCDLLNVTPK NIVSITEQCK FSFLFAPMCH PTLKNVAPIR 180
  181 KQLGLPTIFN LVGPLLNPIP TYARIIGVSK LSLGEVVAKT LLKLGAGRSL VVCGEEGLDE 240
  241 ISPAGPTHTW LVRDGTITHE VYTPESFHLQ SHPLSSVASG TPSANAILLE ELLSNMLHAN 300
  301 HPILDYVLMN TAALLHVAGM AESLREGVKI AQQSISSGAA LRELSNFSTI SQQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..354] PSI-BLAST 94.69897 Anthranilate phosphoribosyltransferase (TrpD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anthranilate phosphoribosyltransferase activity
    		•  4.81240054558791 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.10935430322097 bayes_pls_golite062009
  • catalytic activity
    		•  1.99182579317454 bayes_pls_golite062009
  • transferase activity
    		•  1.94624792134779 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.10712828233974 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle