YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: tfs1

General Information:
Name(s) found: tfs1 / SPAC20H4.03c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • transcription elongation factor TFIIS [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: regulation of RNA elongation [IC]
    regulation of transcription, DNA-dependent [IEA]
    positive regulation of translational elongation [ICLink to PubMed article]
    RNA elongation from RNA polymerase II promoter [ISSLink to PubMed article]
    mRNA cleavage [ISS]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]
    protein binding [IPILink to PubMed article]
    translation elongation factor activity [IEA]
    general RNA polymerase II transcription factor activity [IC]
    positive transcription elongation factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSADIRSAK AALEKAIQGK NIETIINIMT RLKNEVVATE ELLKETRLGL VVGKLRSHPN  60
   61 EKVGEQAREI VKKWKADVSK GRPLKTTTTT SSTPSKHADV GSQAQKQVQK QSSSGQRTFK 120
  121 SDNVNVNVTD DKIRNNCIGL MYNALVIDSD ESSSLIIAKA KEIDAQVLAR AAGKTGSEYR 180
  181 NRMRSLYMNL KDKNNPKLRA SVLRNEITPQ RLSTMTSAEL ASEDRRKEDA KLEQENLFHA 240
  241 QGAKPQKAVT DLFTCGKCKQ KKVSYYQMQT RSADEPMTTF CECTVCGNRW KFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..293] PSI-BLAST 57.69897 RNA polymerase II-TFIIS complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle