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Protein Overview: SPAC23C11.09

General Information:
Name(s) found: SPAC23C11.09 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • alanine-tRNA ligase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 959 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: alanyl-tRNA aminoacylation [ISSLink to PubMed article]
    mitochondrial translation [RCALink to PubMed article]
    Molecular Function: ATP binding [IEA]
    alanine-tRNA ligase activity [ISSLink to PubMed article]
    tRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAESEVVNW PANEIRRTFL KYFEDHGHTI VPSSSVIPYD DPTLLFANAG MNQFKPIFLG  60
   61 TVDPSSDFAK LKRACDSQKC IRAGGKHNDL EDVGKDNYHH TMFEMLGNWS FGDYFKKEAI 120
  121 AMAWDLLTNV YGLKKDQLYV TYFGGHEESG LEPDLEARQL WLDIGIDESR VIPGSLKDNF 180
  181 WEMGDQGPCG PCSEIHYDRI GNRTVPELVN MDDPNVLEIW NIVFIQFNRE KDGSLRPLPN 240
  241 RHVDTGMGFE RLVSVIQNKT SNYDTDVFSP IFAKIQELTN ARPYTGKMGD EDVDGIDTAY 300
  301 RVVADHVRTL TFAISDGGVP NNEGRGYVLR RILRRGARYV RKKFGVPIGN FFSRLSLTVV 360
  361 EQMGDFFPEL KRKVDDVREL LDEEEESFSR TLDRGEKMFE QYAAAAKKTP SKTLQGNDVW 420
  421 RLYETYGFPV DLTHLMAEEA GIKIDEPGFE AAQARSKEIS KQASKGGSSG DDLLVLDVHA 480
  481 LGALSKMDDI PETDDVFKHN SVSLKSVIKG IYHKGGFQKS TEGFNSGEQL GLLLDRTNFY 540
  541 AEQGGQEYDT GHIVIDGVAD FRVTNVQVYA GYVLHTGFLE YGNLTVNDSV VCEYDEIRRW 600
  601 HLMNNHTVTH ILNLALRNTL GDGIDQRGSL VSQEKLRFDF SYKSSIPIDK LLLVENYCNN 660
  661 VIQDNLSVYS KEVALSKAKE INGLRAVFGE VYPDPVRVVC IGVDIDTLLQ EPKKPDWTKY 720
  721 SIEFCGGTHC DKSGEIKDFV ILEENGIAKG IRRIVAVTST EANRVSRLAN EFDARIAKLE 780
  781 KMPFSPAKEA ELKKISVDLS KLVVAAVRKH AMKERIAKIT KQVQEHVKAI NAAEQKEVVN 840
  841 VVTEYFKENP DMSFVVAKVP ISANPKALSF ALTYAKKNLK DKSIYLLASD DTKVAHACLV 900
  901 SPEAMKKLTP QEWSQKVCHS IGGRSGGKGD TCQGVGDKPL SIDVAVEEAI EFFQGKLTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..500] PSI-BLAST 1000.0 The crystal structure of the catalytic fragment of the alanyl-tRNA synthetase
    2 View Details [501..862] PSI-BLAST 61.221849 Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS)
    3 View Details [863..959] Pfam 8.744727 No description for PF02272.10 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle