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Protein Overview: srb4

General Information:
Name(s) found: srb4 / SPBC31F10.04c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • mediator complex subunit Srb4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: mediator complex [IDALink to PubMed article][NAS]
    Biological Process: gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: protein binding [IPILink to PubMed article]
    RNA polymerase II transcription mediator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEANKDAD ISSLSLSLDP EIIGGQNNFL ENNLQQIFQK IIQERGPFRD LKEEDLQKEL  60
   61 QKESIKDESS AKSSETENVL EFATLDSKRN VNDTEVESMD SQAYKKELIE QIMIAQTECS 120
  121 LALDMTSLLL SKFKENSIET ISPFLKSTVP PSSLQFSRSQ PPESKESDAT LAKCWKEKSL 180
  181 TSSCKFLFEA KERLTSVVET EHEYYTELVK VKEASWPLFN SQGSNHLSVQ YSCLGGISLG 240
  241 LGLIRMKPES KSFEVQSSLL YSQAALKISI LNKDRDEIGS STWSWPSQNC NSVLLKDIYK 300
  301 LQEILFEMDI WNSLLQEAQS CGNQGVNFTG DEILVPISDD HVVRITLETS SKNTESGFTE 360
  361 DKKSNEDTST NFVTIKQEKE LLKCLCDTLN AIAHILFLKH CRKSDRRSQQ PELYMAIDAN 420
  421 APLILRPLIF YYNLNQESLE FQRWLKQRDI SFKFMPNYPW EKAKDFLELE NSLSINRLSI 480
  481 SWRIMVSNFE PAIFIQHTPT LHGTDKSVWR CKDQYSSNQF SSLKNVCQYI EHHINSLSRR 540
  541 SKKTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] deduced N/A No confident structure predictions are available.
    2 View Details [290..368] MSA 1.016987 View MSA. Confident ab initio structure predictions are available.
    3 View Details [369..545] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle