General Information: |
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Name(s) found: |
scd1 /
SPAC16E8.09
[Sanger Pombe]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Schizosaccharomyces pombe |
Length: | 872 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
site of polarized growth [IDA] cell division site [IDA] cell tip [IDA] mating projection tip [IDA] spindle [IDA] cytosol [IDA] |
Biological Process: |
regulation of barrier septum formation
[IGI]
regulation of establishment or maintenance of cell polarity [IMP] regulation of cell morphogenesis [IMP] regulation of Cdc42 GTPase activity [TAS] regulation of endocytosis [IMP] regulation of spindle elongation [IMP] regulation of conjugation with cellular fusion by signal transduction [IMP] |
Molecular Function: |
protein binding
[IPI]
Rho guanyl-nucleotide exchange factor activity [TAS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MAYFQDRKTS SRSLPSYINH STQNLVGPRK DETNLSEYMK LRLLQSPSQV IYNLENTVSL 60 61 YRRCLNLRKR LMDISELAAF FDSIHREALN SSFKILEFKD IEFDDPVTEI WLFCRLGYPL 120 121 CALFNCLPVK QKLEVNSSVS LENTNVCKAS LYRFMLMCKN ELGLTDAALF SISEIYKPST 180 181 APLVRALQTI ELLLKKYEVS NTTKSSSTPS PSTDDNVPTG TLNSLIASGR RVTAELYETE 240 241 LKYIQDLEYL SNYMVILQQK QILSQDTILS IFTNLNEILD FQRRFLVGLE MNLSLPVEEQ 300 301 RLGALFIALE EGFSVYQVFC TNFPNAQQLI IDNQNQLLKV ANLLEPSYEL PALLIKPIQR 360 361 ICKYPLLLNQ LLKGTPSGYQ YEEELKQGMA CVVRVANQVN ETRRIHENRN AIIELEQRVI 420 421 DWKGYSLQYF GQLLVWDVVN VCKADIEREY HVYLFEKILL CCKEMSTLKR QARSISMNKK 480 481 TKRLDSLQLK GRILTSNITT VVPNHHMGSY AIQIFWRGDP QHESFILKLR NEESHKLWMS 540 541 VLNRLLWKNE HGSPKDIRSA ASTPANPVYN RSSSQTSKGY NSSDYDLLRT HSLDENVNSP 600 601 TSISSPSSKS SPFTKTTSKD TKSATTTDER PSDFIRLNSE ESVGTSSLRT SQTTSTIVSN 660 661 DSSSTASIPS QISRISQVNS LLNDYNYNRQ SHITRVYSGT DDGSSVSIFE DTSSSTKQKI 720 721 FDQPTTNDCD VMRPRQYSYS AGMKSDGSLL PSTKHTSLSS SSTSTSLSVR NTTNVKIRLR 780 781 LHEVSLVLVV AHDITFDELL AKVEHKIKLC GILKQAVPFR VRLKYVDEDG DFITITSDED 840 841 VLMAFETCTF ELMDPVHNKG MDTVSLHVVV YF |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..127] | 13.30103 | No description for 2d86A was found. | |
2 | View Details | [128..594] | 85.39794 | No description for 2pz1A was found. | |
3 | View Details | [595..767] | 1.533996 | View MSA. No confident structure predictions are available. | |
4 | View Details | [768..872] | 2.58 | Solution Structure of the PB1 Domain of Cdc24p (Long Form) |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | ||||||||||||||||||||||||||||||||||||
2 | No functions predicted. | ||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | ||||||||||||||||||||||||||||||||||||
4 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)