| Protein: | scd1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 872 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scd1.
| Description | E-value | Query Range |
Subject Range |
|
|
385.0 | [0..45] | [868..12] |
|
|
369.0 | [0..9] | [868..6] |
|
|
368.0 | [0..51] | [868..17] |
|
|
365.0 | [0..51] | [870..17] |
|
|
358.0 | [0..45] | [870..11] |
|
|
355.0 | [0..9] | [787..4] |
|
|
352.0 | [0..77] | [737..1] |
|
|
352.0 | [0..77] | [737..1] |
|
|
351.0 | [0..77] | [737..1] |
|
|
351.0 | [0..77] | [737..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MAYFQDRKTS SRSLPSYINH STQNLVGPRK DETNLSEYMK LRLLQSPSQV IYNLENTVSL 60
61 YRRCLNLRKR LMDISELAAF FDSIHREALN SSFKILEFKD IEFDDPVTEI WLFCRLGYPL 120
121 CALFNCL
|
| Detection Method: |  |
| Confidence: | 13.30103 |
| Match: | 2d86A |
| Description: | No description for 2d86A was found. |
|
Region A: Residues: [128-594] |
1 11 21 31 41 51
| | | | | |
1 PVKQKLEVNS SVSLENTNVC KASLYRFMLM CKNELGLTDA ALFSISEIYK PSTAPLVRAL 60
61 QTIELLLKKY EVSNTTKSSS TPSPSTDDNV PTGTLNSLIA SGRRVTAELY ETELKYIQDL 120
121 EYLSNYMVIL QQKQILSQDT ILSIFTNLNE ILDFQRRFLV GLEMNLSLPV EEQRLGALFI 180
181 ALEEGFSVYQ VFCTNFPNAQ QLIIDNQNQL LKVANLLEPS YELPALLIKP IQRICKYPLL 240
241 LNQLLKGTPS GYQYEEELKQ GMACVVRVAN QVNETRRIHE NRNAIIELEQ RVIDWKGYSL 300
301 QYFGQLLVWD VVNVCKADIE REYHVYLFEK ILLCCKEMST LKRQARSISM NKKTKRLDSL 360
361 QLKGRILTSN ITTVVPNHHM GSYAIQIFWR GDPQHESFIL KLRNEESHKL WMSVLNRLLW 420
421 KNEHGSPKDI RSAASTPANP VYNRSSSQTS KGYNSSDYDL LRTHSLD
|
| Detection Method: | |
| Confidence: | 85.39794 |
| Match: | 2pz1A |
| Description: | No description for 2pz1A was found. |
|
Region A: Residues: [595-767] |
1 11 21 31 41 51
| | | | | |
1 ENVNSPTSIS SPSSKSSPFT KTTSKDTKSA TTTDERPSDF IRLNSEESVG TSSLRTSQTT 60
61 STIVSNDSSS TASIPSQISR ISQVNSLLND YNYNRQSHIT RVYSGTDDGS SVSIFEDTSS 120
121 STKQKIFDQP TTNDCDVMRP RQYSYSAGMK SDGSLLPSTK HTSLSSSSTS TSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [768-872] |
1 11 21 31 41 51
| | | | | |
1 SVRNTTNVKI RLRLHEVSLV LVVAHDITFD ELLAKVEHKI KLCGILKQAV PFRVRLKYVD 60
61 EDGDFITITS DEDVLMAFET CTFELMDPVH NKGMDTVSLH VVVYF
|
| Detection Method: | |
| Confidence: | 2.58 |
| Match: | 1q1oA |
| Description: | Solution Structure of the PB1 Domain of Cdc24p (Long Form) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.21864685713998 | bayes_pls_golite062009 |
| Rho guanyl-nucleotide exchange factor activity | 1.03402678056727 | bayes_pls_golite062009 |
| protein binding | 0.989073783870014 | bayes_pls_golite062009 |
| signal transducer activity | 0.635646176656368 | bayes_pls_golite062009 |
| molecular transducer activity | 0.635646176656368 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.416736165411261 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.416404907234896 | bayes_pls_golite062009 |
| phospholipase binding | 0.386109322229891 | bayes_pls_golite062009 |
| small GTPase regulator activity | 0.328454638295227 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.199913902916545 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.122901168586355 | bayes_pls_golite062009 |
